Gene Information

Name : CTC02098 (CTC02098)
Accession : NP_782660.1
Strain : Clostridium tetani E88
Genome accession: NC_004557
Putative virulence/resistance : Resistance
Product : transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2233073 - 2233711 bp
Length : 639 bp
Strand : -
Note : -

DNA sequence : 
ATGTCAATTGTAAAGATGGAGAATATAACTAAAAAATTTGGAGATAAAATTATACTAAATAATTTTTCACTAGATATACA
AGATGGAGAACTCCTAGCTGTAACTGGAGCAAGTGGAAGTGGAAAATCTACTATATTAAATATAATAGGGCTTTTAGAGG
GTTTTGATTCTGGAAAGCTTATTTTAGATGGTGATGAAAATATAAAAATAAATTCATCGAAATCAAATAAGATATTAAGA
GAAAAAATAGGATATTTATTTCAAAACTTTGCATTAGTAGATGAAGAAACAGTATATTATAATCTACATTTAGCACTTAA
ATATGTTAAGAAAAATAAAAAAGAAAAAGATGAATTGATAAAAAATGTATTAAAGCAAATGAATTTAGAAGGATATGAAA
AGAGAAAAATCTTTGAGTTAAGTGGCGGAGAGCAACAAAGAGTTTCAATAGCAAGATTATTATTAAAACCAAGCAAGATA
ATTTTAGCTGATGAACCAACGGGATCATTAGATGCTAAAAATAGAGACTTAGTATTATACTATTTAAATAAACTCAACAA
AGAAGGAAAAACAGTAATAGTAGTAACTCATGATATGGAAGTTGCTAAAAAGTGTCATAGAACTATATCTTTAAATTAA

Protein sequence : 
MSIVKMENITKKFGDKIILNNFSLDIQDGELLAVTGASGSGKSTILNIIGLLEGFDSGKLILDGDENIKINSSKSNKILR
EKIGYLFQNFALVDEETVYYNLHLALKYVKKNKKEKDELIKNVLKQMNLEGYEKRKIFELSGGEQQRVSIARLLLKPSKI
ILADEPTGSLDAKNRDLVLYYLNKLNKEGKTVIVVTHDMEVAKKCHRTISLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-40 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CTC02098 NP_782660.1 transporter NC_012469.1.7686946. Protein 5e-41 57
CTC02098 NP_782660.1 transporter CP003583.1.gene613.p Protein 3e-25 43
CTC02098 NP_782660.1 transporter NC_012469.1.7686878. Protein 2e-23 41