Gene Information

Name : phoP (CTC01953)
Accession : NP_782524.1
Strain : Clostridium tetani E88
Genome accession: NC_004557
Putative virulence/resistance : Virulence
Product : alkaline phosphatase synthesis transcriptional regulatory protein phoP
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2077470 - 2077997 bp
Length : 528 bp
Strand : -
Note : -

DNA sequence : 
ATGTTACCTGGAATAGATGGATTTCAGGTTTGCAAAGAATTAAGACAAGAATTTCCTAGCATGGGTATAATAATGCTTAC
AGCAAGAACTCAAGATATGGACAAAATTATGGGTTTAGAATTTGGAGCAGATGATTATGTAGTAAAGCCCTTTAATCCAT
CAGAACTTATATTAAGGATTAAAGCATTGTTAAGAAGAATTAATTCTACTGACAGTACAAAGGAAAATATTTTAGTTAGC
AGTATATTTAAAATAAACACATATTCACAAAAGATATATAAAAATGAAAAGGAAATAGATGTTACCCCAAAAGAATACAT
GATTTTAAAAATATTTTTAGAAAATGAAGAAAAAGCTTTTAGTAGAGATGAATTGTTAGATTTAGTTTGGGGATATGATT
TTGTAGGAGATCCTAAAATTGTAGATGTAAATATAAGGAGATTAAGAGCTAAAATAGAAGATGAACCTTCTAATCCAAAA
TACATAGAAACCGTATGGGGTAAAGGATATAGATGGAGAAAATTATAA

Protein sequence : 
MLPGIDGFQVCKELRQEFPSMGIIMLTARTQDMDKIMGLEFGADDYVVKPFNPSELILRIKALLRRINSTDSTKENILVS
SIFKINTYSQKIYKNEKEIDVTPKEYMILKIFLENEEKAFSRDELLDLVWGYDFVGDPKIVDVNIRRLRAKIEDEPSNPK
YIETVWGKGYRWRKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-28 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 7e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP HE999704.1.gene2815. Protein 2e-32 46
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP DQ212986.1.gene4.p01 Protein 2e-25 44
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP AF162694.1.orf4.gene Protein 5e-22 42
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_014475.1.orf0.gen Protein 2e-26 42
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_005054.2598277.p0 Protein 2e-26 42
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_013450.8614146.p0 Protein 7e-21 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002951.3238224.p0 Protein 7e-21 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_007793.3914065.p0 Protein 7e-21 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002758.1121390.p0 Protein 7e-21 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_010079.5776364.p0 Protein 7e-21 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002952.2859858.p0 Protein 7e-21 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_007622.3794948.p0 Protein 7e-21 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_003923.1003417.p0 Protein 7e-21 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP AF130997.1.orf0.gene Protein 6e-21 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP AE016830.1.gene1681. Protein 2e-30 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_012469.1.7685629. Protein 2e-26 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002952.2859905.p0 Protein 8e-31 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP HE999704.1.gene1528. Protein 5e-24 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_007793.3914279.p0 Protein 7e-31 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_007622.3794472.p0 Protein 7e-31 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002745.1124361.p0 Protein 7e-31 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_009782.5559369.p0 Protein 7e-31 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002951.3237708.p0 Protein 7e-31 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_003923.1003749.p0 Protein 6e-31 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002758.1121668.p0 Protein 7e-31 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_009641.5332272.p0 Protein 7e-31 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_013450.8614421.p0 Protein 7e-31 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP AM180355.1.gene1830. Protein 1e-24 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP EU250284.1.orf4.gene Protein 2e-25 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP CP004022.1.gene1676. Protein 9e-23 41
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP AE000516.2.gene3505. Protein 4e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP VFG1563 Protein 1e-28 42
phoP NP_782524.1 alkaline phosphatase synthesis transcriptional regulatory protein phoP VFG1702 Protein 2e-28 42