Gene Information

Name : CTC01916 (CTC01916)
Accession : NP_782493.1
Strain : Clostridium tetani E88
Genome accession: NC_004557
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2045786 - 2046490 bp
Length : 705 bp
Strand : -
Note : -

DNA sequence : 
ATGAGAAAGGAGACTCACATAATGGAGTTTTTAAGAATTGAAAATTTATGCAAGGTCTACGGCAAGGGCGAAAACCAAGT
TACCGCGCTTGACCATGTTTCGCTTACAATCGAAAAGGGGGAGTTTACCGCAATCATCGGCTCCTCTGGCTCCGGCAAAT
CCACATTGCTTCACATCATCGCCGGCGTGGACGTGCCGACAAGCGGAAAGGTGTATTTGGACGGGCAGGATGTATATGCC
CAAAGCAATGAAAAACTGGCTATTTTCCGCAGGCGACAGGTTGGGCTGATTTACCAGTTCCACAACCTCATTCCCACTCT
GAATGTAGTGGAAAACATCACCTTGCCTATATTGATGGACAAGCGGAAGGTCAACGAGGAACGGCTGAATGACTTGTTAG
ACCTGCTTGGGTTAAAAGATCGAAAAATGCATTTACCCAATCAGCTTTCAGGCGGTCAGCAACAGCGCGTTTCCATAGGA
CGTGCTTTGATGAATGCCCCAGCGGTCATGCTTGCTGACGAACCCACGGGTAGTTTGGACAGCCGAAATGGACATGAAAT
TATCAATCTGCTGAAATTAAGCAATCAAAAATATCAGCAGACCCTTATCGTCGTCACGCATGACGAAAATATCGCCCTGC
AAGCAGACCGCATTATCGGCATATCAGACGGTAAAGTAGTGCGAGACGAGAGGGTGAGACCATGA

Protein sequence : 
MRKETHIMEFLRIENLCKVYGKGENQVTALDHVSLTIEKGEFTAIIGSSGSGKSTLLHIIAGVDVPTSGKVYLDGQDVYA
QSNEKLAIFRRRQVGLIYQFHNLIPTLNVVENITLPILMDKRKVNEERLNDLLDLLGLKDRKMHLPNQLSGGQQQRVSIG
RALMNAPAVMLADEPTGSLDSRNGHEIINLLKLSNQKYQQTLIVVTHDENIALQADRIIGISDGKVVRDERVRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-31 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CTC01916 NP_782493.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-51 54
CTC01916 NP_782493.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-47 52
CTC01916 NP_782493.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-27 43