|
Name : CTC01888 (CTC01888) Accession : NP_782466.1 Strain : Clostridium tetani E88 Genome accession: NC_004557 Putative virulence/resistance : Virulence Product : tetanolysin O Function : - COG functional category : - COG ID : - EC number : - Position : 2007254 - 2008837 bp Length : 1584 bp Strand : - Note : - DNA sequence : ATGAACAAAAATGTATTAAAATTTGTATCACGTTCATTGCTAATATTTTCAATGACTGGCTTAATATCTAATTATAATTC CAGTAATGTATTAGCTAAAGGAAATGTAGAGGAACATTCATTAATCAATAATGGACAAGTAGTAACGTCAAATACAAAAT GTAATTTGGCAAAAGACAACAGTAGTGACATAGACAAAAATATTTATGGATTATCCTATGATCCACGTAAGATATTATCA TATAATGGTGAACAGGTAGAAAATTTTGTACCTGCTGAAGGATTTGAAAATCCAGATAAGTTCATTGTGGTAAAACGTGA GAAGAAGAGTATTTCAGATTCCACAGCAGACATTTCAATTATAGACTCAATAAATGATAGAACTTATCCTGGAGCTATAC AACTTGCTAACAGAAATCTTATGGAAAACAAACCTGATATAATTTCATGTGAGAGAAAACCTATTACTATAAGTGTTGAC TTACCGGGTATGGCTGAAGATGGTAAGAAAGTTGTTAATTCACCTACCTACTCCTCAGTTAATTCTGCAATAAATTCTAT ATTAGATACATGGAATTCAAAGTATTCATCTAAATATACTATACCTACAAGAATGAGTTATTCTGATACTATGGTGTATA GCCAATCACAGTTATCTGCAGCAGTTGGATGCAATTTTAAAGCTTTAAACAAAGCATTAAATATAGATTTTGATTCCATA TTTAAAGGTGAAAAAAAGGTTATGCTTCTTGCATACAAACAAATTTTTTATACAGTAAGTGTAGACCCACCAAATCGTCC ATCAGATTTATTTGGTGATAGTGTAACTTTTGATGAATTGGCTTTAAAGGGGATAAATAATAATAATCCTCCTGCATATG TTTCAAATGTTGCATATGGTAGAACAATTTATGTAAAACTTGAAACTACCTCTAAGAGTTCACATGTTAAAGCAGCTTTT AAAGCACTAATCAATAACCAGGATATAAGTAGTAATGCAGAATATAAGGATATATTAAATCAAAGTTCATTTACAGCTAC TGTTTTAGGGGGAGGAGCACAAGAACATAATAAGATAATCACTAAGGATTTTGATGAAATAAGAAATATTATTAAAAATA ATTCAGTGTATAGTCCACAAAATCCAGGATATCCAATTTCATATACTACTACATTTTTAAAAGACAATAGTATAGCATCC GTAAATAATAAAACAGAATATATAGAAACAACTGCAACAGAATATACTAATGGTAAAATAGTACTTGATCATAGTGGAGC GTATGTTGCTCAATTCCAAGTAACATGGGATGAGGTTAGCTATGACGAAAAGGGAAATGAAATAGTTGAACATAAAGCTT GGGAAGGAAATAATAGAGATAGAACGGCTCATTTTAATACAGAAATATATTTAAAAGGAAATGCACGAAATATATCTGTA AAAATAAGAGAATGTACAGGTCTTGCATGGGAATGGTGGAGAACCATTGTAGATGTTAAAAATATACCACTAGCAAAAGA AAGAACTTTCTATATATGGGGTACAACATTATATCCAAAGACATCAATTGAAACTAAAATGTAA Protein sequence : MNKNVLKFVSRSLLIFSMTGLISNYNSSNVLAKGNVEEHSLINNGQVVTSNTKCNLAKDNSSDIDKNIYGLSYDPRKILS YNGEQVENFVPAEGFENPDKFIVVKREKKSISDSTADISIIDSINDRTYPGAIQLANRNLMENKPDIISCERKPITISVD LPGMAEDGKKVVNSPTYSSVNSAINSILDTWNSKYSSKYTIPTRMSYSDTMVYSQSQLSAAVGCNFKALNKALNIDFDSI FKGEKKVMLLAYKQIFYTVSVDPPNRPSDLFGDSVTFDELALKGINNNNPPAYVSNVAYGRTIYVKLETTSKSSHVKAAF KALINNQDISSNAEYKDILNQSSFTATVLGGGAQEHNKIITKDFDEIRNIIKNNSVYSPQNPGYPISYTTTFLKDNSIAS VNNKTEYIETTATEYTNGKIVLDHSGAYVAQFQVTWDEVSYDEKGNEIVEHKAWEGNNRDRTAHFNTEIYLKGNARNISV KIRECTGLAWEWWRTIVDVKNIPLAKERTFYIWGTTLYPKTSIETKM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| slo | YP_281505.1 | streptolysin O | Virulence | Not named | Protein | 1e-119 | 55 |
| hly | AAA69525.1 | listeriolysin O | Virulence | LIPI-1 | Protein | 1e-111 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CTC01888 | NP_782466.1 | tetanolysin O | VFG2275 | Protein | 9e-131 | 60 |
| CTC01888 | NP_782466.1 | tetanolysin O | VFG0976 | Protein | 4e-120 | 55 |
| CTC01888 | NP_782466.1 | tetanolysin O | VFG0074 | Protein | 7e-112 | 48 |
| CTC01888 | NP_782466.1 | tetanolysin O | VFG1363 | Protein | 2e-101 | 46 |
