Gene Information

Name : CTC01821 (CTC01821)
Accession : NP_782408.1
Strain : Clostridium tetani E88
Genome accession: NC_004557
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1935040 - 1935720 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAATATTAAAAGTTGAAAACTTATCAAAGATTTATGGAGAAGGGAATAATAGAGTAGAAGCACTTAGAAATGTATC
ATTTGCAATAGAAAGAGGGGAATTTGTTGCCATAGTAGGGGCATCTGGTTCAGGAAAAAGTACCTTACTTCATATGATAG
GCGGACTAGATAAACCAACTTCAGGAAAAGTTTATATAGATGGAGAAGATATATATAAATTAAAGGAAGATAATTTAGCC
ATATTTAGAAGAAGAAATGTTGGATTTGTATTTCAGTTCTTCAATTTAATACCTGTGCTAAATGTAGAAGAGAATATATC
CCTACCAGCTTTATTGGATAAAGATAAAATAGATAAAGCTTATTTAAAAGAAGTAGTAGAGATGCTTGGATTAAAAGAAA
GAATAACACATCTTCCATCTGAATTATCAGGAGGACAACAACAAAGGGTTTCCATTGGAAGAGCCTTAATAAATAAACCA
TCTATAATCCTTGCAGATGAACCTACAGGAAACTTAGATAGCAAAAATAGTAAAGAAGTAATAGAACTTTTAAAATATTC
TTCTAAAAAATATAACCAAACCCTTATAATTATAACTCATGACATGAATATAGCAGAACAGGCAGATAGGGTAATAAATA
TAGTGGACGGTGAAATTAAATCTGATAACAAAATAAGATAG

Protein sequence : 
MEILKVENLSKIYGEGNNRVEALRNVSFAIERGEFVAIVGASGSGKSTLLHMIGGLDKPTSGKVYIDGEDIYKLKEDNLA
IFRRRNVGFVFQFFNLIPVLNVEENISLPALLDKDKIDKAYLKEVVEMLGLKERITHLPSELSGGQQQRVSIGRALINKP
SIILADEPTGNLDSKNSKEVIELLKYSSKKYNQTLIIITHDMNIAEQADRVINIVDGEIKSDNKIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-38 43
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 5e-38 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-38 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CTC01821 NP_782408.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-68 62
CTC01821 NP_782408.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 8e-61 57
CTC01821 NP_782408.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-41 46
CTC01821 NP_782408.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-37 44
CTC01821 NP_782408.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 6e-40 43