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Name : CTC01604 (CTC01604) Accession : NP_782211.1 Strain : Clostridium tetani E88 Genome accession: NC_004557 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1723411 - 1724859 bp Length : 1449 bp Strand : - Note : - DNA sequence : ATGAGTGAATTAAAATATAATTTTACTGTAAATACAGATGCAATAGAGTCAATACCTATTAATATTGCAGAAAAATATCT TATTTTCCCATATGATATAGATCATAAATTTATTTATATTATGTCAAGTAAAAAACTTTTAACCTACGAAGAAGAAGAAA TAAAGTTTATGGCAGGAAAGGATTTAAAGAGTTATACAGAGGATTCAAACTATATAAGAGAATGCATAAATAAATTTTAT TATAAAAAAGAAGCGATTTATATAACTAATATATCAAAAGAAAATAAAAGTAAATATACTAAACAAGATTATGAATATTT GGAAGATGAAAACTCTCCAGGGGTAAAAATGTTAAATTATTTTTTAAAAGAAGCTATATTTAAAAAAGCTAGTGATATTC ATATAGAACCCTTTGAAGGTAAAGCAATAGTAAGATTTAGAATAGATGGAGTATTACATGAGTTTTGGAAATTATCACAA GAACTATATAGGCAAATAAAAGGAAGAATAAAAATACTTTCTAACATGGATATAGCAGAGAAAAGATATCCTCAGGATGG TAAGTTTAAATTCAATTTTTATAAAAAAGATTTAGATATAAGAGTATCTACTATGCCTACACTATATGATGAAAAGATAG TGATGAGACTTTTATATAAATCAGAGGTTTTAATAAAATTAAAGGATTTGGGGTTTTATGGAGAATCTTTTCATGAAATC AAAAAAATATCCAAGTATTCTAGCGGAATGATATTAGTTACAGGACCTACAGGAAGTGGGAAAACCACTACACTATATTC CATAATAAATGAGATGGATAAAAAACATAGAAATATTATAACCATTGAAGAACCAGTGGAATATAGCATGGACGGAGTAA ATCAAATTAATATAAGAGAAAAAATAGGTATGACCTTTAGTAATGTATTAAAATACACACTAAGACAGGATCCAGACGTA ATAATGATTGGAGAAATAAGAGATAAGGAGACTGCAAAAATAGCTATAAGAGCGTCGCTAACAGGACATTTAGTATTAGC TTCTCTGCATACAAAAGATCCTTTGTCTTCAATTATAAGGTTAATAGATATGGGAGTGCCGGATTATCTTTTAATGGAAG CATTAAATGCAATAATATCTCAAAGACTTGTAAGAAAATTATGCCCCTTTTGTAAGGAAAAATTTTTTTATGAAGCCATG AATAGTGAGATTTATAAAAAAGTTGGGTGTGAAAAATGTAATGACACGGGATATCTTGGCAGAGTATTAATCTATGAAAA AGTTATTCTAGATGAAGATATAAAAGAAATGGTTCTAAAGGGTTGTAACATGAACGAAATTAGAAAGTATACCTTGGAAA AGAATAAAACTAATTTAGAAGAAAATGCTCTAAATTTAATAAAGAAAGGAAAGACTTCTATAGAAGAGTTAGAAAAACTT AATTTTTAA Protein sequence : MSELKYNFTVNTDAIESIPINIAEKYLIFPYDIDHKFIYIMSSKKLLTYEEEEIKFMAGKDLKSYTEDSNYIRECINKFY YKKEAIYITNISKENKSKYTKQDYEYLEDENSPGVKMLNYFLKEAIFKKASDIHIEPFEGKAIVRFRIDGVLHEFWKLSQ ELYRQIKGRIKILSNMDIAEKRYPQDGKFKFNFYKKDLDIRVSTMPTLYDEKIVMRLLYKSEVLIKLKDLGFYGESFHEI KKISKYSSGMILVTGPTGSGKTTTLYSIINEMDKKHRNIITIEEPVEYSMDGVNQINIREKIGMTFSNVLKYTLRQDPDV IMIGEIRDKETAKIAIRASLTGHLVLASLHTKDPLSSIIRLIDMGVPDYLLMEALNAIISQRLVRKLCPFCKEKFFYEAM NSEIYKKVGCEKCNDTGYLGRVLIYEKVILDEDIKEMVLKGCNMNEIRKYTLEKNKTNLEENALNLIKKGKTSIEELEKL NF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-78 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-78 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CTC01604 | NP_782211.1 | general secretion pathway protein E | VFG0112 | Protein | 2e-67 | 42 |
| CTC01604 | NP_782211.1 | general secretion pathway protein E | VFG2048 | Protein | 1e-79 | 41 |
