Gene Information

Name : CTC01419 (CTC01419)
Accession : NP_782040.1
Strain : Clostridium tetani E88
Genome accession: NC_004557
Putative virulence/resistance : Resistance
Product : transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1531482 - 1532165 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence :

ATGGAAGTTTTAAAGACCATTGATTTAAGTAAAAGTTATGGTTTAGGAGATACTAAGGTTAACGCACTAAAAAATATAAA
TATATCTATAAATGAAGGGGAGTTTGTAGCTGTAGTAGGGGCTAGCGGCTCTGGAAAGAGTACATTATTACACCTATTAG
GAGGAGTGGACAAACCTACATCAGGAAAGGTAATAGTTGATGGAGCAGATATATATGCCTTAAGCGAAAAAGAACTTGCT
GTATTTAGAAGAAGAAAGATAGGTTTTATATTTCAATTTTATAATTTAATACCTGTATTAACAGCAGAAGAAAATATAAC
TCTTCCAATACTTTTAGATAATAAGAAGGTTGATAAAAAATATGAGGAGGAATTAATTAATATTTTAGGATTACAAAATA
GAAGAAATCACCTTCCCTCAGAACTTTCAGGGGGACAGCAACAAAGGGTGTCTATAGGGAGAGCATTAGCTTATAAACCT
TCAATAATATTAGCAGATGAACCTACAGGGAATTTAGATAGTAAAAATAGTAAGGAAATAATAGAGCTACTTAGATTTTC
AGTGCAAAAATATCATCAAACATTAATAATTATAACCCATGATTTAAATATTGCATCTCAGGCAGACAGAATAATAACGA
TAGAGGATGGATCTGTAGTTAAAGATGAGGTGATGAGAGCATGA

Protein sequence :

MEVLKTIDLSKSYGLGDTKVNALKNINISINEGEFVAVVGASGSGKSTLLHLLGGVDKPTSGKVIVDGADIYALSEKELA
VFRRRKIGFIFQFYNLIPVLTAEENITLPILLDNKKVDKKYEEELINILGLQNRRNHLPSELSGGQQQRVSIGRALAYKP
SIILADEPTGNLDSKNSKEIIELLRFSVQKYHQTLIIITHDLNIASQADRIITIEDGSVVKDEVMRA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	3e-37	44
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	2e-38	43
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	2e-38	43
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	2e-38	43

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
CTC01419	NP_782040.1	transporter	CP001581.1.gene798.p	Protein	9e-64	59
CTC01419	NP_782040.1	transporter	CP001581.1.gene598.p	Protein	1e-57	55
CTC01419	NP_782040.1	transporter	NC_012469.1.7686878.	Protein	1e-40	49
CTC01419	NP_782040.1	transporter	NC_008702.1.4606598.	Protein	3e-38	45
CTC01419	NP_782040.1	transporter	NC_012469.1.7685735.	Protein	1e-37	44