Gene Information

Name : CTC01196 (CTC01196)
Accession : NP_781829.1
Strain : Clostridium tetani E88
Genome accession: NC_004557
Putative virulence/resistance : Virulence
Product : ferrichrome ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 1279432 - 1280439 bp
Length : 1008 bp
Strand : +
Note : -

DNA sequence : 
ATGATTAATGATATGAAAAATATGAAAGAAATAAATAAGATAATTATTATATTACTCTCTTTTTTATTATTAATAAGTTT
AATAGTTATAACAATTGGAATGGGTAGTGTAAATTTACCGATTGGAGATATAATAGATGTTTTTTTAGGAAAAGGAAGTA
AAATAAATGAAAGTATAATAATGGACATGAGGTTACCTAGAATAATTCTTGCAGTATTTGTAGGAGCAGGACTTTCTATA
TCAGGGGCTTTATTACAATCTGTTATGAAAAACCCACTAGCAGACCCAGGAATAACAGGAGTATCTTCTGGAGGAAGCTT
AGCAGCTATTTTGATAATGCTATATTTTCCACAAATGTATAAGGCACTGCCTCTTATAGCTTTTTTAGGATCTATATTGG
CATGTACTATAGTATTCTTTTTATCTTGGGATAATGGTATAAAACCTATGAGAGTAATTTTATCTGGAGTGGCTGTGAAT
GCAATGTTTTTAGGAGCAACTTCATTATTGGCTATATTGAATACAGAAAAAATTCAAGGAGTCTTACTATGGGTAAATGG
AAGTATTGCATATAGGGGTTGGAGAGAAGTTGGTTATTTTTTACCCTATTGTATTATAGGAATTCTGTTATCATTTTTTT
GCATAAGAGGAGCTAATATATTAGCACTTGGAGATGATGTCGCTACTAATTTAGGTGTAAATGTAAATAGAACAAGAATA
TTAATATCTGTAGTGGCAGTATTTTTAGCAGGAATAAGTACGTCAGCTGTTGGGATTATAGGATTTATAGGTCTTATAGT
ACCACATATATGTAGGCTTATATTAGGATATGATTATAAGACTTTGGTCCCATTGAGTGCGATTTTGGGAGGAACAATAT
TACTTTTAGCAGATACCTTAGCACGATATATAGCAAGACCAATAGAATTACCAGTAGGGGTATTAATGTCTATGATAGGC
GGACCATTTTTCTTATTCTTACTAAGGAGGCGAAAGGACAATGCTTAA

Protein sequence : 
MINDMKNMKEINKIIIILLSFLLLISLIVITIGMGSVNLPIGDIIDVFLGKGSKINESIIMDMRLPRIILAVFVGAGLSI
SGALLQSVMKNPLADPGITGVSSGGSLAAILIMLYFPQMYKALPLIAFLGSILACTIVFFLSWDNGIKPMRVILSGVAVN
AMFLGATSLLAILNTEKIQGVLLWVNGSIAYRGWREVGYFLPYCIIGILLSFFCIRGANILALGDDVATNLGVNVNRTRI
LISVVAVFLAGISTSAVGIIGFIGLIVPHICRLILGYDYKTLVPLSAILGGTILLLADTLARYIARPIELPVGVLMSMIG
GPFFLFLLRRRKDNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 1e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CTC01196 NP_781829.1 ferrichrome ABC transporter BAC0163 Protein 8e-36 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CTC01196 NP_781829.1 ferrichrome ABC transporter VFG1043 Protein 7e-36 42