Gene Information

Name : CTC01130 (CTC01130)
Accession : NP_781768.1
Strain : Clostridium tetani E88
Genome accession: NC_004557
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1195145 - 1195843 bp
Length : 699 bp
Strand : +
Note : -

DNA sequence : 
ATGTCACAAGATAAGATTTTAATAGTGGATGATGAAGAGCATATTAGAGAACTTCTTAGATATAATTTAGAAAAAGAAGG
CTATAAAATTTTTTGTGCTGAAAATGGAAAAGAAGCTTTAGAAATAGCTAAAGAAAAAAAACCTACACTAATTTTACTGG
ATGTCATGTTACCACAAATGGATGGGTATGACGTATGCAAAGAAATAAGAAAAGATAATTCTATATCCACTACACCCATT
ATAATGATAACTGCTAAAGGTGAAGAATTAGATAAGGTGTTAGGATTAGAACTTGGTGCAGATGATTATATAACAAAACC
CTTTTCCATTAGGGAATTGATTGCCAGAATAAAAGCTGTACTGAGAAGAACTTTATTAAAGAGTACAGAGGAACCTTTTA
AATTTGAAGGTTTAAAAATGGATTTTGAAAAACATGAAGTAATGAAAGACGGGGAAAAAGTTGATTTAACCCTTAAAGAA
TTTCAATTGTTAGAAATACTTATTAAAAATAAAGGAAGAGTATTAACTAGAGAATATTTATTAGATAAAATATGGGGATA
TGAATATATAGGAGAAACTAGGACAGTAGACGTACATATAAGACATTTAAGACAGAAGGTAGAGGATGATGATAAAAACC
CTAAGTATATAGAAACTATTAGAGGAGTGGGATATAGGTTCAATCTAAATATAAATTAA

Protein sequence : 
MSQDKILIVDDEEHIRELLRYNLEKEGYKIFCAENGKEALEIAKEKKPTLILLDVMLPQMDGYDVCKEIRKDNSISTTPI
IMITAKGEELDKVLGLELGADDYITKPFSIRELIARIKAVLRRTLLKSTEEPFKFEGLKMDFEKHEVMKDGEKVDLTLKE
FQLLEILIKNKGRVLTREYLLDKIWGYEYIGETRTVDVHIRHLRQKVEDDDKNPKYIETIRGVGYRFNLNIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-37 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CTC01130 NP_781768.1 transcriptional regulatory protein NC_012469.1.7686381. Protein 1e-50 52
CTC01130 NP_781768.1 transcriptional regulatory protein HE999704.1.gene2815. Protein 1e-53 52
CTC01130 NP_781768.1 transcriptional regulatory protein NC_002952.2859905.p0 Protein 2e-53 50
CTC01130 NP_781768.1 transcriptional regulatory protein NC_013450.8614421.p0 Protein 3e-53 50
CTC01130 NP_781768.1 transcriptional regulatory protein NC_012469.1.7685629. Protein 3e-50 50
CTC01130 NP_781768.1 transcriptional regulatory protein NC_007793.3914279.p0 Protein 3e-53 50
CTC01130 NP_781768.1 transcriptional regulatory protein NC_003923.1003749.p0 Protein 2e-53 50
CTC01130 NP_781768.1 transcriptional regulatory protein NC_002745.1124361.p0 Protein 3e-53 50
CTC01130 NP_781768.1 transcriptional regulatory protein NC_009782.5559369.p0 Protein 3e-53 50
CTC01130 NP_781768.1 transcriptional regulatory protein NC_002951.3237708.p0 Protein 3e-53 50
CTC01130 NP_781768.1 transcriptional regulatory protein NC_002758.1121668.p0 Protein 3e-53 50
CTC01130 NP_781768.1 transcriptional regulatory protein NC_007622.3794472.p0 Protein 2e-53 50
CTC01130 NP_781768.1 transcriptional regulatory protein NC_009641.5332272.p0 Protein 3e-53 50
CTC01130 NP_781768.1 transcriptional regulatory protein AE016830.1.gene1681. Protein 2e-50 48
CTC01130 NP_781768.1 transcriptional regulatory protein NC_005054.2598277.p0 Protein 6e-40 46
CTC01130 NP_781768.1 transcriptional regulatory protein NC_014475.1.orf0.gen Protein 6e-40 46
CTC01130 NP_781768.1 transcriptional regulatory protein NC_002951.3238224.p0 Protein 4e-37 44
CTC01130 NP_781768.1 transcriptional regulatory protein NC_007793.3914065.p0 Protein 4e-37 44
CTC01130 NP_781768.1 transcriptional regulatory protein NC_002758.1121390.p0 Protein 4e-37 44
CTC01130 NP_781768.1 transcriptional regulatory protein NC_010079.5776364.p0 Protein 4e-37 44
CTC01130 NP_781768.1 transcriptional regulatory protein NC_002952.2859858.p0 Protein 4e-37 44
CTC01130 NP_781768.1 transcriptional regulatory protein NC_007622.3794948.p0 Protein 4e-37 44
CTC01130 NP_781768.1 transcriptional regulatory protein NC_003923.1003417.p0 Protein 4e-37 44
CTC01130 NP_781768.1 transcriptional regulatory protein NC_013450.8614146.p0 Protein 4e-37 44
CTC01130 NP_781768.1 transcriptional regulatory protein AE000516.2.gene3505. Protein 1e-41 44
CTC01130 NP_781768.1 transcriptional regulatory protein AE015929.1.gene1106. Protein 4e-34 43
CTC01130 NP_781768.1 transcriptional regulatory protein HE999704.1.gene1528. Protein 7e-37 42
CTC01130 NP_781768.1 transcriptional regulatory protein FJ349556.1.orf0.gene Protein 2e-41 41
CTC01130 NP_781768.1 transcriptional regulatory protein AF155139.2.orf0.gene Protein 3e-41 41
CTC01130 NP_781768.1 transcriptional regulatory protein DQ212986.1.gene4.p01 Protein 2e-36 41
CTC01130 NP_781768.1 transcriptional regulatory protein AM180355.1.gene1830. Protein 2e-37 41
CTC01130 NP_781768.1 transcriptional regulatory protein BAC0125 Protein 3e-35 41
CTC01130 NP_781768.1 transcriptional regulatory protein CP001138.1.gene2239. Protein 2e-33 41
CTC01130 NP_781768.1 transcriptional regulatory protein CP001918.1.gene3444. Protein 8e-34 41
CTC01130 NP_781768.1 transcriptional regulatory protein CP000034.1.gene2186. Protein 4e-34 41
CTC01130 NP_781768.1 transcriptional regulatory protein NC_002695.1.916589.p Protein 4e-34 41
CTC01130 NP_781768.1 transcriptional regulatory protein BAC0596 Protein 2e-33 41
CTC01130 NP_781768.1 transcriptional regulatory protein CP000647.1.gene2531. Protein 5e-34 41
CTC01130 NP_781768.1 transcriptional regulatory protein BAC0039 Protein 4e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CTC01130 NP_781768.1 transcriptional regulatory protein VFG1563 Protein 1e-37 43
CTC01130 NP_781768.1 transcriptional regulatory protein VFG1702 Protein 6e-37 42
CTC01130 NP_781768.1 transcriptional regulatory protein VFG1390 Protein 3e-41 41