|
Name : thiC (PD0903) Accession : NP_779119.2 Strain : Xylella fastidiosa Temecula1 Genome accession: NC_004556 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1112871 - 1114682 bp Length : 1812 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : GTGAACATCACCACTGCCCTCCCCCTTCCCACCCACTTGCTGTCGGAGAAGGTGACTGCACCTTTACTTGGCGCACGCAA AATTTACGTTACCGGATCACGCCAAGATATACGTGTGCCAATGCGCGAAATCGCACTCACACCCAGCTCAGCTCGATACG GCGGAAACGAGAATCTATCACTGGTGCTCTATGACACTTCGGGAATTTACACTGATCCGCAAGCTACGATTGACTTAGCG TGTGGTCTACCTCGATTACGCACTGCTTGGATTGATGAGCGTGCCGATACCGTAGAAGCTAAGTTGCATTTCAAAGTACC TGAGTCGGTATCTGTCACCGCACCGCCTTTTCCTACACCGCCACAGCCACTGCGTGCACGTGACAATGTCGCGGTAACGC AACTGGAATATGCACGACGTGGTCTCGTCACTCCAGAAATGGAGTTTGTCGCTATCCGTGAGCAACAACGCCGTGAACAA ACTGTCGAAAATCTTCGCGGCCAGCGCCATGCGGGTGATGCCTGGGGGGCTTTGGTTGGCACACCCATCACTCCTGAATT CGTACGTGATGAAATCGCGCGTGGCCGGGCCATTCTTCCTAATAACATCAACCATCCTGAAAGCGAGCCAATGATTATTG GCCGCAACTTTTTGACAAAAATCAATGCCAATATTGGAACATCAGCCCTGTCTTCCAGTATTGCCGAAGAAGTGGAGAAG CTGGTTTGGGCGATCCGCTGGGGCGCAGACACAATCATGGACCTCTCTACTGGCCGTGACATCCATGCTACTAGAGAATG GATTCTGCGTAATTCACCTGTTCCTGTGGGGACGGTGCCAATTTATCAAGCGTTGGAGAAAGTCGATGGACATGTTGATG CTCTGAGTTGGGACGTGTTTCGTGACACTTTGATCGAACAGGCCGAACAAGGTGTGGACTATGTCACCGTGCATGCAGGA GTCCTTCGAGACTTTATCCCACTGACTGCTTCACGTTTAACAGGAATCGTCTCGCGTGGCGGTTCCATCATGGCTAGATG GTGTCAGGCACACCGCAGCGAAAACTTCCTATACACGCATTTCGAGGAACTCTGTGAAATCATGCGTGCCTACGACGTGG CATTCTCTCTGGGTGATGGATTGCGCCCAGGCTGCATCGCTGATGCGAATGATGCAGCTCAATTTGCTGAATTGGAGATT CTTGGCAAGTTGACCCACATCGCCTGGAATCACCAAGTACAGGTGATGGTAGAAGGTCCTGGACACGTCCCAATGCAGCT AATCAAGGCCAATATGGATAAGCAATTAGCCGCCTGTGGTGAGGCACCTTTCTACACGCTAGGTCCATTAACTACAGATA TCGCCCCAGGTTACGACCACATTACTAGTGCAATTGGCGCGGCAATGATCGGCTGGTATGGGACAGCGATGCTATGTTAC GTGACTCCCAAGGAGCACCTTGGCCTGCCTAATTTGCAAGATGTCCATGATGGCATCATCGCCTACAAAATTGCGGCACA TGCGGCTGATCTTGCCAAAGGGCATCCAGCGGCACAGGCACGTGACGATGCACTCTCTAAAGCACGCTTTGAATTCCGCT GGCAAGATCAATTCCATCTCAGCTTGGATCCAGAAAAAGCACTGGCACTGCATGATGAGAGCCTCCCTAAAGAAGCGCAT AAACGAGCAGCATTCTGTTCGATGTGCGGACCGCAATTTTGTTCAATGAAAATCTCTCAAGAGGTCCGTGACGCTTCCTC CAGCGAATTGTCAGATGCAAATACGGATATCAATACCAGCGACGGCATCTAG Protein sequence : MNITTALPLPTHLLSEKVTAPLLGARKIYVTGSRQDIRVPMREIALTPSSARYGGNENLSLVLYDTSGIYTDPQATIDLA CGLPRLRTAWIDERADTVEAKLHFKVPESVSVTAPPFPTPPQPLRARDNVAVTQLEYARRGLVTPEMEFVAIREQQRREQ TVENLRGQRHAGDAWGALVGTPITPEFVRDEIARGRAILPNNINHPESEPMIIGRNFLTKINANIGTSALSSSIAEEVEK LVWAIRWGADTIMDLSTGRDIHATREWILRNSPVPVGTVPIYQALEKVDGHVDALSWDVFRDTLIEQAEQGVDYVTVHAG VLRDFIPLTASRLTGIVSRGGSIMARWCQAHRSENFLYTHFEELCEIMRAYDVAFSLGDGLRPGCIADANDAAQFAELEI LGKLTHIAWNHQVQVMVEGPGHVPMQLIKANMDKQLAACGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWYGTAMLCY VTPKEHLGLPNLQDVHDGIIAYKIAAHAADLAKGHPAAQARDDALSKARFEFRWQDQFHLSLDPEKALALHDESLPKEAH KRAAFCSMCGPQFCSMKISQEVRDASSSELSDANTDINTSDGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 68 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 68 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 66 |
