Gene Information

Name : nagA (PD0684)
Accession : NP_778906.1
Strain : Xylella fastidiosa Temecula1
Genome accession: NC_004556
Putative virulence/resistance : Virulence
Product : N-acetylglucosamine-6-phosphate deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1820
EC number : -
Position : 838347 - 839507 bp
Length : 1161 bp
Strand : +
Note : -

DNA sequence : 
GTGATGGGTGTTTCTTCTGGCATCACAGGGTTCATCAATGGCCGCATTCTGACCGATACCGGGTTCCGTCATGATCTGGC
GGTGTTGTTGCGTGAGGGCAGCATTCACGCACTGGTGCCACATGATGATCCGTGGGTGATGGAGGTTGCGCAGTGGGTGG
ACTTGCAGGGAGGTCTGTTGCTGCCTGGGTTTATCGATATTCAGGTGAATGGCGGCGGCGGCGTGCTGTTCAATAATGCG
CGTGATGTGGATGGCTTGGCCACAATTGCGCGTGCGCACCGTCGCTACGGGACGACGGGACTGTTACCCACATTGATTAG
TGACACTGTGGAGGTGATGGCTGAGGCCATTGCTGCCACGCGTGCCGCGATTGCTCAGGGGGTACCGGGAATCCTGGGGA
TTCACTTGGAAGGCCCTTACCTCAATCCCCTGCGTAAAGGGATCCATGACCATACTCAATTCCGTGTGCCGCAGTTGCAT
GAGCTGATGCGGTGCACGGCATTGGATAACGGGGTGACTCTGGTGACGTTGGCGCCTGAGCAGGTGCCGGTTGAGATGAT
TCGTGTTTTTGTCGAGCGTGGTGCGATCGTCTTTGCCGGGCATACCGCAGCGACGTATGAGCAAGTGCGGGCTGGCATTG
CAGCGGGTGTCACAGGGTTTACGCATCTGTACAACGCGATGTCGCAGTTAGTCGGGCGCGAGCCGAATGTGGTGGGTGCT
GCGCTGGAAGATCCGAATACATGGTGCGGGATCATTGTTGATGGCGTACACGTACATCCGGCGAGTCTGCGTGTGGCCTT
AGCCGCCAAGCCGCGCGGTAAGGTGCTGCTGGTGACCGATGCGATGCCACCAGTTGGCAGTGACAGTGTTCACTATGATC
TCTATGGTGAAACGATTACGGTGATGGATGGTGTGGTCCGTAATGCGGCTGGTGCGTTGGCGGGTGCCGCGCTGGATATG
GCAACGGCGGTGCGCAATACGGTGCATTGGTTGGGTGTTGATTTGGCTGAGGCTGTGCGCATGGCCTCGACCTATCCGGC
GCAGTGCATTGGGTTAGGGGATCGTCTGGGGAGGATTGCGCCTGGTTATCAAGCCGACCTGGTGTGGGTTGATGACGACG
TGCAGGTACAGGGCACGTGGATTGCTGGTGTGGGCGCTTGA

Protein sequence : 
MMGVSSGITGFINGRILTDTGFRHDLAVLLREGSIHALVPHDDPWVMEVAQWVDLQGGLLLPGFIDIQVNGGGGVLFNNA
RDVDGLATIARAHRRYGTTGLLPTLISDTVEVMAEAIAATRAAIAQGVPGILGIHLEGPYLNPLRKGIHDHTQFRVPQLH
ELMRCTALDNGVTLVTLAPEQVPVEMIRVFVERGAIVFAGHTAATYEQVRAGIAAGVTGFTHLYNAMSQLVGREPNVVGA
ALEDPNTWCGIIVDGVHVHPASLRVALAAKPRGKVLLVTDAMPPVGSDSVHYDLYGETITVMDGVVRNAAGALAGAALDM
ATAVRNTVHWLGVDLAEAVRMASTYPAQCIGLGDRLGRIAPGYQADLVWVDDDVQVQGTWIAGVGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nagA ACA01848.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 3e-54 42
VC1783 NP_231418.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 4e-54 42
nagA-2 YP_001217323.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 4e-54 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nagA NP_778906.1 N-acetylglucosamine-6-phosphate deacetylase VFG1116 Protein 2e-54 42