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Name : vipA (PD0468) Accession : NP_778697.1 Strain : Xylella fastidiosa Temecula1 Genome accession: NC_004556 Putative virulence/resistance : Virulence Product : polysaccharide biosynthetic protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 558504 - 559805 bp Length : 1302 bp Strand : + Note : - DNA sequence : TTGAGTGGCATGGTTGCTGATAAGCAAGGGGGGCCAACGTTGGCGCGCATCGCCGTGGTTGGACTAGGGTATGTGGGATT GCCGTTGGCGGTTGCGTTTGGTCGACAGCGTCCGACACTTGGGTTCGACATTGATATATGTCGGGTACAGCAGTTGTGTG CCGGTCATGACATTACTTGTGAAATTGAGCTTGAGGAACTCCAAGCTGCGCGACATTTGCGTTATAGCAGTGATCCTCGG GAATTGAGTGACTGTCAGATTTTCATCATTACGGTGCCTACCCCTATTGATGTGGTTGAGCAACCGGATTTGGGGCCGCT TCGTTCGGCCAGCATGTTGGTTGCGTCGGTACTTAAGCCTGGGGATTTAGTGATCTATGAGTCCACAGTTTATCCGGGCA CAACGGAGGAAGTCTGTGTGCCATTGCTGGAGGCTGGGTCTGGGTTGCGCTTTAATGTCGATTTTCATTGTGGTTACAGT CCTGAGCGGATTAACCCTGGTGATCGTAAGCGTCGGCTACAGGACATCTGCAAGATTATTTCAGGTTCCACCCCTGATAT TACAGCTGTCGTGGACGCGTTATATTCGCAGATCATCGTTGCTGGTACTTGGTGTGCTCCGTCGATCAGAGTTGCCGAGG CAGCTAAGGTGGTTGAGAACATTCAGCGTGACGTGAATATTGCGTTGGTCAATGAGTTGGCATTGATCTTTGATCGGCTC GGTATCGACACCTTGGACGTTCTCGAAGCGGCAGAAACCAAGTGGAATTTTTTGCCTTTCCGCCCGGGTTTGGTGGGTGG TCATTGCATCGGTGTGGATCCTTACTATTTGTTGCACAAATCCGAGAGTGTGGGGTATTACCCGGATTTGATTCATACGG CACGTCGCGTTAACAATCGTGTTAGTCGGCATGTTGTGGACCGTGTTGTGGCTTTACTTGGTGAGCTTAGTGTGCCGATG ACACGTGCCGTGGTGCTTGTGTTGGGTGTTACCTTCAAGGAAGATTGCCCCGATTTACGTAACAGCCGCGCTTTGGATTT GGTGCGCATGTTCAGGACTTTAGGTGCGCAAGTCGATGTTTGCGATCCTTGTGCTGATCCGCAGCAAGCGTTGGAGCATG AGGCTGTCACGTTGTGTACGGAGCCCAAGGCCGGTGCTTATGATGCAATTGTGCTCGCGGTGGCGCATGCCCAGTACCGA ATGTACGATGTAGCGACTATTGCAGCTCTAGGTAAGTCGCAGGCGGTGGTTTATGATGTCAAATCAGTGTGGCCGCGTGC AGCGGTAACTGATCGTCTATAG Protein sequence : MSGMVADKQGGPTLARIAVVGLGYVGLPLAVAFGRQRPTLGFDIDICRVQQLCAGHDITCEIELEELQAARHLRYSSDPR ELSDCQIFIITVPTPIDVVEQPDLGPLRSASMLVASVLKPGDLVIYESTVYPGTTEEVCVPLLEAGSGLRFNVDFHCGYS PERINPGDRKRRLQDICKIISGSTPDITAVVDALYSQIIVAGTWCAPSIRVAEAAKVVENIQRDVNIALVNELALIFDRL GIDTLDVLEAAETKWNFLPFRPGLVGGHCIGVDPYYLLHKSESVGYYPDLIHTARRVNNRVSRHVVDRVVALLGELSVPM TRAVVLVLGVTFKEDCPDLRNSRALDLVRMFRTLGAQVDVCDPCADPQQALEHEAVTLCTEPKAGAYDAIVLAVAHAQYR MYDVATIAALGKSQAVVYDVKSVWPRAAVTDRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 4e-99 | 53 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 4e-99 | 53 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 7e-82 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| vipA | NP_778697.1 | polysaccharide biosynthetic protein | VFG0431 | Protein | 2e-99 | 53 |
