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Name : serS (PD1318) Accession : NP_779518.1 Strain : Xylella fastidiosa Temecula1 Genome accession: NC_004556 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1546548 - 1547828 bp Length : 1281 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGATCCGACTCTACTCCGTCAACAACTTGCGAAACTCGCTGAATGCTTGTTGACTGTACGCGGTTTCACTCTTGA TGTTGCAGCCCTTGAAGCATTGGAAAGCGAACGTAAACGTATCCAGGTGCATACCCAAGAGTTGCAATCCCTGCGTAACA GTAAATCCAAGGCGATTGGCCAAGCCAGGAGCAAGGGTGAAGATGTGTCTGCGTTAATGGCTGAGGTTGCCGCTTTTAGT GATGATTTAAAAGCCTCGGAGATAGCGTTGGAGGAAATCCGTACTGAATTAGAGAAAGTGGCCTTGGATATTCCCAATTT GCCACAGCAAGATGTGCCGTTGGGTGCCGATGAACGTGACAACGTAGAGCAGGCCCGTTGGGGAGTGCCACGTACGTTTG ATTTTGCCATCAAGGATCATGTTGAATTGGGTGCGTGTCATGGTTGGTTAGATGCCGAGAGTGCTGCCAAGCTATCCGGT GCGCGTTTCACTGTATTGCGTGGCCCCATTGCACGGCTGCATCGCGCACTGGCGCAGTGCATGCTTGACTTACATGTTAG CCAGCATGGATACGAAGAAGTCAATGTCCCAATCATTGTCAATGCAGACAGCTTACATGGGACTGGTCAACTACCGAAAT TTGAAGAGGACATGTTCAGTACTCAGCTCGGTGAGCATCGGCGCTATTTGATTTCGACCTCTGAAATTTCACTGACTAAT TTAGTACGTAACGAGATTATTGAGGCGGATCGCCTGCCGTTGCGTATGGTTGCACACTCATTGTGTTTCCGTTCCGAGGC AGGCAGCGGTGGTCGTGATACGCGTGGCATGATTCGTCAGCACCAGTTTGAGAAGGTCGAATTGGTCAGCGTATGTAAAC CGCAAGACAGTGAAGGTGAGCACCATCGTATGACTCGCTGCGCAGAGACAGTGTTGGAAATGCTGGGACTGCCCTACCGC AAGATCCTGCTGTGTACCGGTGATATGGGATTTGCTGCGACCAAAACCTACGACTTGGAAGTTTGGCTGCCGTCGCAGGG AATGTATCGCGAGATTTCATCGTGTTCCAACTGCGGTGATTTCCAAGCCAGACGCATGCAAGCCCGTTGGCGCAATTCTG TCACCGGCAAACCGGAATTGGTACACACACTCAACGGTTCTGGTGTCGCTGTTGGCCGTGCGATGATTGCGGTGATGGAG AACTATCAGAATGCTGATGGTTCGATTACGGTGCCGGAGGTGTTGCGTCCTTACATGGATGGTTTGAGTCGGATTGGTTG A Protein sequence : MLDPTLLRQQLAKLAECLLTVRGFTLDVAALEALESERKRIQVHTQELQSLRNSKSKAIGQARSKGEDVSALMAEVAAFS DDLKASEIALEEIRTELEKVALDIPNLPQQDVPLGADERDNVEQARWGVPRTFDFAIKDHVELGACHGWLDAESAAKLSG ARFTVLRGPIARLHRALAQCMLDLHVSQHGYEEVNVPIIVNADSLHGTGQLPKFEEDMFSTQLGEHRRYLISTSEISLTN LVRNEIIEADRLPLRMVAHSLCFRSEAGSGGRDTRGMIRQHQFEKVELVSVCKPQDSEGEHHRMTRCAETVLEMLGLPYR KILLCTGDMGFAATKTYDLEVWLPSQGMYREISSCSNCGDFQARRMQARWRNSVTGKPELVHTLNGSGVAVGRAMIAVME NYQNADGSITVPEVLRPYMDGLSRIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-93 | 50 |
