Gene Information

Name : hemC (PD1152)
Accession : NP_779358.1
Strain : Xylella fastidiosa Temecula1
Genome accession: NC_004556
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 1349775 - 1350692 bp
Length : 918 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence : 
ATGCCTTTACTTCGTATTGCTACTCGCAAAAGTTTACTTGCTATGTGGCAAAGCGAGTATGTCGCTGCGCGTTTACGTAT
GCTGTGCCCTGATTTAGATGTGGTGTTGGTGCCGATGAGCACTCGTGGCGATGAGATCCTGGATCGCTCCCTGGCTGCAA
TTGGTGGTAAAGGGCTGTTTCTCAAGGAGCTGGAACTGGCGATGTTACGTGGTGATGCTGATTGCGCGGTGCATTCGCTG
AAAGATGTGCCTATGGATTTGGAGCCCCCATTTATGCTTGCGGCTGTTTTGAGTCGTGATGACCCGGCCGATGCGCTGAT
TTCTAATGTCTACCTTTCGCTAGAGTCACTCCCAATTGGGGCGCGTGTGGCGACTTCTTCGCTGCGCCGACAAGCCCAGT
TACGCTTTTATCGGCCTGACCTGCGGTTGTTTGACTTGCGGGGTAACGTTAACACGCGCTTGGCGAAGCTTGATAACGGA
GATTACGATGCGATCGTGCTGGCTTGTGCGGGGTTACGTCGGCTAGGATTGGAGCAACGCATGACGGCTCGGCTAGCACC
GCCAGAATGGTTACCTGCGCCAGGTCAGGGGGCGATTGCGGTGGAGTCACTGACCGAGGATGCTCGGATCGGTACGTTGT
TGGCTGGTCTTGACGATCTGCCAACGCGCAAATGCGTGATTGCTGAGCGTACGATGAATCGTGCTCTTCATGGTAGCTGC
CATGTGCCAGTGGGGGCTTATGCATCCTACGAAGTTGGTGGTATGCGATTACAGGGCTTGGTGGGTTGTGTTGCCGATGG
TCGTCTCGTGCGTGCGGAGCTGTGTTCGGCAAAGGATGAGGGCGATATGCTCGGCAGGGCAGTCGCACAGTGCTTGTTGG
ATGCTGGTGCGGCTGAGTTGCTAGCCGCCACTGCATAG

Protein sequence : 
MPLLRIATRKSLLAMWQSEYVAARLRMLCPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFLKELELAMLRGDADCAVHSL
KDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGARVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNG
DYDAIVLACAGLRRLGLEQRMTARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRKCVIAERTMNRALHGSC
HVPVGAYASYEVGGMRLQGLVGCVADGRLVRAELCSAKDEGDMLGRAVAQCLLDAGAAELLAATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-53 52
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-53 52