|
Name : PD1137 (PD1137) Accession : NP_779343.1 Strain : Xylella fastidiosa Temecula1 Genome accession: NC_004556 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : K : Transcription COG ID : COG0553 EC number : - Position : 1328703 - 1330121 bp Length : 1419 bp Strand : + Note : - DNA sequence : ATGAACCTGCGCCCCTACCAACACACCATCGTTGATTTCATCCTGACGCACCCACGCTGCAATCTGTTTGTGCCCATGGG TTTGGGGAAGACAGTAGCCACGCTGACGGCGTTAGATGTGCTTCTGGTGGTGGAAGACATTGCGCCTATTTTGGTGATTG CTCCGCTGCGCGTTGCGGCCACGACATGGCCGGATGAGGTGGCCAAGTTCCCCCATTTGCGCCATCTGCGGGTGTCCGTG GTCGTGGGTAGTGCGGCAGCACGTCGCCACGCCTTGGAGCAGGAGGCGGATATCTACTGCATTAATTACGACACTCTGAA ATGGTTAGTGGAGTTTTACAAGGACCGTTGGCCGTTCCGTATGGTGGTCGCCGATGAGTGCTCCAAGTTGAAAGGGTTCC GGCTGCGGCAAGGAACACGGCGCGCCCGCGCACTGGCCACGCATGTGCATACCAAGGTGGAGCGCTACGTTGGGTTGACC GGCACGCCCGCGCCCAATGGGCTACAGGACCTGTGGGCGCTGATGTGGATGGTGGATCGTGGGGCACGGCTTGGGACGCA TTTTAAAGCGTTTATCGATCGCTGGTTCCGTGCGATGCAGATCGGCAGTGATCCGCATGCGGTGCGCTTTGTGCCCACGC CACATGCATCTCAAGAGATTCAAGACAAGATACGCGATATCTGTTTATCACTTGATCCACATGCGTACTTCGATTTATGC CAGCCGATTGTCAATACGATTCGCGTTGCGTTGCCAGCACATGCGCAACGTCTGTACAAGGCGATGGAACAAGATATGTT CATCGCCTTGGAATGCGGTGCTGAAGTAGAAGCCTTTAACGCCGCCAGCAAGACAATTAAATGCCTGCAACTGGCCAATG GTGCGCTGTACACCGATGACACACGTCAGGCCTGGGAAGTCGTGCACGATGCGAAATTAGAGGCGCTGCACGACATTATC GAAGAAGCCGCCGGTATGCCGGTGTTGGTGGCGTATCACTTTAAAAGTGATGTCGCACGGTTGCAGCGTGCCTTCCCCAA GGGGCGTGCTTTGGACAAACACCCCGACACGATCCGCGATTGGAATGCGGGGAACATTCCCGTGCTATTTGCCCATCCGG CCAGTGCCGGTCATGGCTTAAATCTGCAAGACGGCGGAAATATTTTGGCCTTCTTTGGCCACTGGTGGGACCTGGAGCAG TACCAGCAGATCATCGAACGCATTGGGCCGACACGTCAGGCGCAAGCCGGACATACGCGGCCTGTATTTATTCACCACAT CGTGGCGGCGGGCACGGTGGATGAATTGGTGATGGCCCGCCGTGAATCTAAACGCGAAGTACAGGACCTGCTGCTGGAAG CGGTGAAACGCAGAGAAACAGGCAAACCACTCACATCACAAGGAGCCATAGCGTTATGA Protein sequence : MNLRPYQHTIVDFILTHPRCNLFVPMGLGKTVATLTALDVLLVVEDIAPILVIAPLRVAATTWPDEVAKFPHLRHLRVSV VVGSAAARRHALEQEADIYCINYDTLKWLVEFYKDRWPFRMVVADECSKLKGFRLRQGTRRARALATHVHTKVERYVGLT GTPAPNGLQDLWALMWMVDRGARLGTHFKAFIDRWFRAMQIGSDPHAVRFVPTPHASQEIQDKIRDICLSLDPHAYFDLC QPIVNTIRVALPAHAQRLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEALHDII EEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASAGHGLNLQDGGNILAFFGHWWDLEQ YQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDELVMARRESKREVQDLLLEAVKRRETGKPLTSQGAIAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH1779 | YP_253694.1 | hypothetical protein | Not tested | ¥ÕSh1 | Protein | 7e-65 | 42 |
| SEQ_2070 | YP_002747285.1 | SNF2 family phage protein | Not tested | ¥ÕSeq4 | Protein | 1e-62 | 41 |
| SAOV_0314 | YP_005735831.1 | putative DNA helicase | Not tested | ¥ÕSa1 | Protein | 9e-67 | 41 |
| SAUSA300_1408 | YP_494105.1 | phage helicase | Not tested | ¥ÕSa2 | Protein | 1e-63 | 41 |
