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Name : mutS (PD1081) Accession : NP_779288.1 Strain : Xylella fastidiosa Temecula1 Genome accession: NC_004556 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1280970 - 1283576 bp Length : 2607 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGAGAGAAAAGCCCGAAGGTGGGAAGGGCATGGCAGAACATACCCCACTGATGAAGCAATACTTCGCCGCCAAGGCTGA GTATCCAGACTTACTTTTGTTCTTCCGTATGGGAGATTTTTACGAGCTTTTTCATCAAGATGCCCGCAAGGCAGCGCGGT TACTCGATATCACTTTGACTCAGCGGGGTAGTTCCGGTGGTACTCCTATCCCAATGGCCGGTGTACCCGTTCATGCCTAT GAAGGCTATTTGGCGCGGCTCATTGCCCTGGGTGAATCCGTTGCGATTTGCGAACAAATTGGAGATCCAGGGCTTGCTAA AGGGTTGGTTGAACGTAAGGTGGTACGCATCGTCACTCCAGGTACGATCACTGAGGAGGCGTTACTGGAGGAGCGTCGCG ACACTCTATTGATGGCCTTATCACGCACTAAAAACTGTTATGGCTTGGCTTGGGCTGACTTAGCCGGTGGCCGTTTCCTG GTGAACGAAGTCGATAGCGAGGAGGCATTAGAAGCCGAACTCGCACGTCTGGAGCCAGCTGAGCTGTTACTCCCTGACGA GGATGCCTGGCCAGAGTATCTACAGCAGCGCAACGGTGTGCGTCGCCGTCCCCCATGGTTGTTTGATGCTGACAGCGGCC GCCGTAAATTACTAGCGTTTTTCAAACTGCACGATTTATCCGGCTTCGGTATCGAAAATAATCCACAAGCTACTGCGGCG GCGGGTGCACTTCTTGGCTACATTGAGGAGACACAGAAGCAGCGTCTGCCGCATCTGACTTCAATTACGATGGAGACTGT TGGCGAAGCGATTACGATGAACGCTGCCACACGTCGCCATTTGGAGCTGGACACCCGTGTGGATGGGGAGAGCCGCCACA CCCTGCTTGGGGTGCTCGATAGTACGGTGACCCCGATGGGCGGACGGTTGCTGCGGCGGTGGCTGCATCGGCCGCTGCGG CTGCGCGAGGTGGTAAGACAACGTCATGCCGCCGTTGGGAGCATGATCGATAGCGATCTCGATAACAAACTCAGGGAGAC TTTCCGTAGGCTTGGCGACATGGAGCGGATTTTGACCCGCGTGGCATTGCGCTCAGCACGTCCACGTGACATCTCCACAT TACGGGATAGCCTCAGCCTCCTGCCACGTTTACGTGAGCTTCTCAATGCATCGGATTCGCCGCGCTTGCGCGTGTTGTAC GCCGAGCTGGGTGAGCATGACAGCACCGCGTCTTTATTGGTAAAAGCCGTCGCAGAACAGCCACCCTTAAAGCTGACTGA TGGCGGTGTGATTGCCCCAGAATACGATGTTGAATTGGACGAACTGCGTAAGCTCTCCAACAACGCGGATCAGTTCTTGA TTGATCTTGAGACACGCGAGCGTGAATCCAGTGGTATTTCTACGCTGAAAGTCGGTTACAACCGTGTGCATGGTTACTAT ATTGAGATCAGCAAGGGCCAAGCCGACAAAGCACCGGTGCATTACACGCGGCGCCAGACACTGACTAACGCCGAGCGCTA CATCACGGAGGAACTGAAAGCGTTCGAAGACAAAGTATTATCCGCGCGTGATCGTGCGTTGGCGCGGGAAAAATTGTTGT ACGAACAGCTGCTGGACACCGTCGGGGCGCAACTGGAACCGCTGAAGCGTTGTGCCGCTGCGCTATCTGAGCTAGATGTA CTTGTCTGCTTTGCCGAGCGCGCACAGACATTGGATTGGGTGCGTCCGGAGTTGGAGCACACATCATGCTTGCATATTGA GGGTGGCCGTCACCCGGTTGTGGAAGCTGTGCGTGAACAGCGATTCGAGCCGAATGACCTCTATCTTCACCCTGAGCGTC GCATGTTGGTTATCACCGGCCCCAATATGGGAGGCAAGTCGACCTACATGCGCCAGAATGCCTTGATTGTCCTGCTTGCT TATATCGGCAGCTACGTTCCGGCCAGCCGCGCGCTGATTGGACCGATTGACCGCATCATGACCCGTATCGGTGCTGGTGA TGACCTGGCCCGAGGTCAGTCTACATTTATGCTTGAGATGACAGAGACCAGCTACATTCTGCACCATGCGACCGCGCAGT CGCTGGTACTGATGGACGAAATTGGTCGGGGGACCTCGACTTACGATGGCTTGGCGTTGGCGGATGCAGTCGCACGCCAC TTAGCTCATATCAACCGTTGTTATACGCTGTTTGCCACGCATTATTTTGAGCTGACTGCACTAGCCGAGGAAACATATGA GGGAGGTCTGAGCGGTATCGCTAACGTGCATTTCGATGCTGTTGAGCATAGTGAACGCTTGGTCTTCATGCACACAGTGA AGGATGGTCCGGCCAATCGCAGTTTTGGCCTACAGGTGGCTGCTTTGGCTGGTCTACCAGCTGCGACCGTCGCACAGGCA CGGCGGCGTTTAGCTGAACTGGAGCAGCGAGGCCGCGAAAGTCATGTTTCAGAAATAACACAGCTGGAATTGGATGCACC GCAGCAGTGCAATTTATTTGCGTCGGCGCCCTCAGCAGCTCAGGAAGCATTGGTTGCATTGCATCCTGATGAGTTGACCC CTAAGCAAGCATTAGAAGCGCTCTACCGACTCAAAGCGCTGCTATAA Protein sequence : MREKPEGGKGMAEHTPLMKQYFAAKAEYPDLLLFFRMGDFYELFHQDARKAARLLDITLTQRGSSGGTPIPMAGVPVHAY EGYLARLIALGESVAICEQIGDPGLAKGLVERKVVRIVTPGTITEEALLEERRDTLLMALSRTKNCYGLAWADLAGGRFL VNEVDSEEALEAELARLEPAELLLPDEDAWPEYLQQRNGVRRRPPWLFDADSGRRKLLAFFKLHDLSGFGIENNPQATAA AGALLGYIEETQKQRLPHLTSITMETVGEAITMNAATRRHLELDTRVDGESRHTLLGVLDSTVTPMGGRLLRRWLHRPLR LREVVRQRHAAVGSMIDSDLDNKLRETFRRLGDMERILTRVALRSARPRDISTLRDSLSLLPRLRELLNASDSPRLRVLY AELGEHDSTASLLVKAVAEQPPLKLTDGGVIAPEYDVELDELRKLSNNADQFLIDLETRERESSGISTLKVGYNRVHGYY IEISKGQADKAPVHYTRRQTLTNAERYITEELKAFEDKVLSARDRALAREKLLYEQLLDTVGAQLEPLKRCAAALSELDV LVCFAERAQTLDWVRPELEHTSCLHIEGGRHPVVEAVREQRFEPNDLYLHPERRMLVITGPNMGGKSTYMRQNALIVLLA YIGSYVPASRALIGPIDRIMTRIGAGDDLARGQSTFMLEMTETSYILHHATAQSLVLMDEIGRGTSTYDGLALADAVARH LAHINRCYTLFATHYFELTALAEETYEGGLSGIANVHFDAVEHSERLVFMHTVKDGPANRSFGLQVAALAGLPAATVAQA RRRLAELEQRGRESHVSEITQLELDAPQQCNLFASAPSAAQEALVALHPDELTPKQALEALYRLKALL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 1e-176 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | NP_779288.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 54 |
