Gene Information

Name : PD1080 (PD1080)
Accession : NP_779287.1
Strain : Xylella fastidiosa Temecula1
Genome accession: NC_004556
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 1280208 - 1280933 bp
Length : 726 bp
Strand : +
Note : -

DNA sequence :
GTGGAAGATATTCGCAGCAATCTAACCAAGGTGTATAGCCGTATCGTTGCTGCCTGCCAAAGTGTTGACCGCGATCCCAG
CAGCGTGACGCTGTTGCCAGTCAGCAAAACCGCGGATGAAGTGCATATCCGATTATCCTACGAAGCCGGATGCAGGAAGC
TCGGAGAGAACAAAGCTCAGGATGCTTACCACAAGTGGGAAGCGATGAGCGATCTCACTGATCTGTATTGGTCGGTCATT
GGGCACCTGCAAACCAATAAAGCCAAGCTAGTTGCACGGTTTGCCTCGGAATTCCAGGCACTCGATAGTTTTCGTGTTGC
AGAAGCATTGGAGCGACGTCTTCAGATAGAGGGACGTAGCCTCGACGTGTTGATTCAAGTCAATACCTCTGGCGAAACAA
ACAAATACGGATTACCTCCCGAAGAAGTTGTCCGTTTCGTACAGGCACTCTCCGCATATCCAGCGCTTCGGGTACGCGGT
TTGATGACGTTGGCAATGCTCTCTGGTGACACCTCGCGGGTGCGGCAATGCTTTACACAGCTGCGCATCCTACGAGATCG
CATCCAACAAGCATCACCCCAGGGCCACCACATAACCGAGCTATCCATGGGCATGTCAGGAGATTTGGAAATAGCTATAG
AAGAAGGGGCGACGGTGGTACGTGTAGGACAGGCAATCTACGGTGCACGTGCCCTACCCAACCTCCACTTTCACCATACT
GTTTAA

Protein sequence :
MEDIRSNLTKVYSRIVAACQSVDRDPSSVTLLPVSKTADEVHIRLSYEAGCRKLGENKAQDAYHKWEAMSDLTDLYWSVI
GHLQTNKAKLVARFASEFQALDSFRVAEALERRLQIEGRSLDVLIQVNTSGETNKYGLPPEEVVRFVQALSAYPALRVRG
LMTLAMLSGDTSRVRQCFTQLRILRDRIQQASPQGHHITELSMGMSGDLEIAIEEGATVVRVGQAIYGARALPNLHFHHT
V

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 4e-40 48
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 4e-40 48
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 4e-40 48
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 4e-40 48