Name : ssb (PD1017) Accession : NP_779229.1 Strain : Xylella fastidiosa Temecula1 Genome accession: NC_004556 Putative virulence/resistance : Unknown Product : single-stranded DNA-binding protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0629 EC number : - Position : 1216175 - 1216621 bp Length : 447 bp Strand : + Note : binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA DNA sequence : ATGGCACGCGGAATTAACAAGGTGATCCTAGTCGGCAACCTGGGGAACGAGCCGGATATCAAATACACCCAAAGCGGCAT GACGATCACCAACATTAGCCTAGCAACCAGCAGCAAACGCAAGGACAGAGAGGGCAATACCCAGGAGCGGACCGAATGGC ACCGCGTCAAGTTTTTCGGAAAGCTGGGCGAGATTGCCGCCGAATATCTGCATAAGGGATCGCAGTGCTACATAGAGGGT GCCATTCGCTACGACAAGTTCACCGGCAATGATGGGCAGGACCGTTATGTCACTGAGATTATTGCTGACCAAATGCACAT GCTCGGCGGTCGCGGCGAAGGCTCCAGCGGCATCACGCCACAGCGGCGACCGGCAAAGGTCCGTAACAACGATAAAGCCT ATGCGTATGCAGGCGACGACTTCCACGATGACGCCCCCCCGTTTTAG Protein sequence : MARGINKVILVGNLGNEPDIKYTQSGMTITNISLATSSKRKDREGNTQERTEWHRVKFFGKLGEIAAEYLHKGSQCYIEG AIRYDKFTGNDGQDRYVTEIIADQMHMLGGRGEGSSGITPQRRPAKVRNNDKAYAYAGDDFHDDAPPF |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
ssb1 | YP_005176252.1 | single-stranded DNA-binding protein | Not tested | ICEPmu1 | Protein | 7e-23 | 47 |