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Name : gspE (CAB916) Accession : YP_220301.1 Strain : Chlamydophila abortus S26/3 Genome accession: NC_004552 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1067470 - 1068963 bp Length : 1494 bp Strand : - Note : Similar to Pseudomonas aeruginosa general secretion pathway protein E XcpR SWALL:GSPE_PSEAE (SWALL:Q00512) (502 aa) fasta scores: E(): 6.1e-69, 47.63% id in 487 aa, and to Chlamydia pneumoniae genral secretion protein E GspE SWALL:Q9Z790 (EMBL:AE001662) ( DNA sequence : ATGGGCGGTAAGTCTTTACTTTCTCAAGAGCTTCTTAATGCTCTACCCTATAGCTTTCTAAAAAAACACTGTTTACTGCC CTTAGAAGAGCAGGAAAACGGCATAACGATGGCTTATGCACACTCGACTTCTCTTATGGCGAAAGATGAGGTGCAGCTGC TGATAAAGAAGCCTGTGCTTTTTATCCTTAGGGATGAAACAGATATCTTAAAAAATTTACAAAAGATCTATTCGAATTTA GAAGGGAAGGCTTCTGACATGCTGTTAAGCATGAAAGAAGGGGGACTCTCTCAAGCAAGTGAAGAGGAAGATCTTTTAGA AAATACAGATGCTGTTCCCGTCGTGCGTTTTTTAAATCTCATTTTAAAAGAGGCTATAGAAGAACGGACTTCGGATATTC ATTTTGAACCTTTGGAAGATTCTTTACGCATACGCTATCGTATTGATGGAGTCTTGCATGACCGTCTTTCTCCACCTGCG CATCTACGTTCGGCTTTGATCACTAGGATTAAAGTTTTAGCGAAGATGGATATCGCAGAGCATCGTCTACCTCAAGATGG AAGAATAAAAATCCAAATAGGCGGCCAGGAAATTGACATGCGTGTGAGTACGGTTCCTGTGATCCACGGGGAGCGTGTTG TTCTGAGGATTTTAGATAAGCGTAATGTCATTCTAGATATCTCTGGGTTGCACATGCCTAAGAATATCGAAAAGTCTTTT AGGGAGGTCATAGCTGTTCCTGAGGGTATTCTCTTGGTGACAGGACCTACAGGAAGCGGAAAAACAACCACGTTGTATAG TGTGATACAGCATCTTTCCGGTCCTTTTGCCAACATTATGACAATAGAAGACCCCCCTGAATACAAGTTGGCAGGAATCG CTCAGATTGCTGTGAAACCTAAAATCGGTTTGTCTTTTGCCTGTGGTTTACGACATTTGCTTCGTCAGGATCCTGATGTT GTAATGGTGGGGGAGATTCGTGATCAGGAGACTGCAGAAATAGCGATACAGGCAGCACTCACAGGACACCTTGTTGTGAG TACATTGCATACTAACGACGCGATTTCTGCCATCCCCCGTCTTTTAGATATGGGAGTAGAACCCTATTTACTTTCGGCAA CAATTATCGGTGTTGTAGCGCAAAGGTTGGTAAGGAAAATCTGTCCTAATTGTAAGGAGCATTGTGCAGCAAGTGTTCAG GAGCGAGCGTTTCTACACTCTATAGGCGTCGATGCCGATGTGCCGTTATATTATGGAAAGGGATGTGCTCAGTGTTTCCG TTCAGGATATAAGGGGCGTCAGGGAATTTACGAATTCTTCCATCCTGATGCAGCCTTGCGTTCGGAAATCGCTATGCATA AGCCCTATCATGTGTTGCGAGAATATGCTGAACAGAAAGGATTTCAACCTTTATTACAACATGGTGTCACTCTAGCTCTT TCAGGAGAGACGACTTTGTCGGAAGTGTTCCGTGTGACGAAACGGTATGACTAA Protein sequence : MGGKSLLSQELLNALPYSFLKKHCLLPLEEQENGITMAYAHSTSLMAKDEVQLLIKKPVLFILRDETDILKNLQKIYSNL EGKASDMLLSMKEGGLSQASEEEDLLENTDAVPVVRFLNLILKEAIEERTSDIHFEPLEDSLRIRYRIDGVLHDRLSPPA HLRSALITRIKVLAKMDIAEHRLPQDGRIKIQIGGQEIDMRVSTVPVIHGERVVLRILDKRNVILDISGLHMPKNIEKSF REVIAVPEGILLVTGPTGSGKTTTLYSVIQHLSGPFANIMTIEDPPEYKLAGIAQIAVKPKIGLSFACGLRHLLRQDPDV VMVGEIRDQETAEIAIQAALTGHLVVSTLHTNDAISAIPRLLDMGVEPYLLSATIIGVVAQRLVRKICPNCKEHCAASVQ ERAFLHSIGVDADVPLYYGKGCAQCFRSGYKGRQGIYEFFHPDAALRSEIAMHKPYHVLREYAEQKGFQPLLQHGVTLAL SGETTLSEVFRVTKRYD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-99 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-99 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_220301.1 | general secretion pathway protein E | VFG0182 | Protein | 8e-95 | 53 |
| gspE | YP_220301.1 | general secretion pathway protein E | VFG1876 | Protein | 3e-98 | 47 |
| gspE | YP_220301.1 | general secretion pathway protein E | VFG2426 | Protein | 5e-76 | 47 |
| gspE | YP_220301.1 | general secretion pathway protein E | VFG2048 | Protein | 5e-100 | 46 |
