Gene Information

Name : CAB424 (CAB424)
Accession : YP_219838.1
Strain : Chlamydophila abortus S26/3
Genome accession: NC_004552
Putative virulence/resistance : Resistance
Product : ABC transporter, ATP-binding component
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 489075 - 489854 bp
Length : 780 bp
Strand : +
Note : Similar to Bacillus subtilis manganese transport system ATP-binding protein MntB SWALL:MNTB_BACSU (SWALL:O34338) (250 aa) fasta scores: E(): 2.9e-35, 46.12% id in 245 aa, and to Pirellula sp manganese transport system ATP-binding protein Rb12438 SWALL:CAD

DNA sequence :
TTGAGTAGACAACATGAAATTGCTTGGTCAGTTCATAACCTATGTGTGAACTATGATCATTCAGATGTTTTATGTCATGT
TTCCTTCCTATTAAGGAAGGGAACATTGACGGCAGTTTTAGGACCCAATGGTGCTGGGAAGAGTACGCTTTTAAAATCTT
CTCTTGGATTGATTCGTCCTTCCACCGGTCATACTTTATTTTTTGGGAATAAGTTTAAAAAAGTACATCAACGTGTTGCT
TATATGCCTCAAAGAGCAAGTGTGGATTGGGATTTTCCCATGACAGTTCTAGATCTCGTGCTTATGGGGTGCTATGGGTA
CAAAGGCATGTGGGGAAGAATTACAGCGGATGACCGTAAGGAAGCATACAGTATTTTAGAGAGGGTAGGTTTATCTGATT
TAGCAAATCGGCAAATAGGGAAGCTTTCAGGAGGTCAGCAGCAGCGAGCGTTCTTAGCTCGGGCTCTTATGCAAAAAGCA
GATCTTTATCTTATGGATGAATTATTTTCTGCTATCGACATGGCTTCGTATCAGACCGTGGTAGATGTTCTGCGGGAGCT
GCAAGAGCAAGGACGTACGGTTGTGGTCGTTCACCATGATCTTAGCCATGTACGTCAATTATTCGACCATATCATATTGT
TGAATAAACATCTTATTTGTTCCGGACCGGTTGAAGAATGTTTAACTAATAAAAACATTTTTCAAGCTTATGGTTGTGAG
TTAGAACTATTGGATCGCACTCTTAAATTATCTAGAGGGAAGCAAGAGGGAACGTATTAG

Protein sequence :
MSRQHEIAWSVHNLCVNYDHSDVLCHVSFLLRKGTLTAVLGPNGAGKSTLLKSSLGLIRPSTGHTLFFGNKFKKVHQRVA
YMPQRASVDWDFPMTVLDLVLMGCYGYKGMWGRITADDRKEAYSILERVGLSDLANRQIGKLSGGQQQRAFLARALMQKA
DLYLMDELFSAIDMASYQTVVDVLRELQEQGRTVVVVHHDLSHVRQLFDHIILLNKHLICSGPVEECLTNKNIFQAYGCE
LELLDRTLKLSRGKQEGTY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 9e-33 43
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 7e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CAB424 YP_219838.1 ABC transporter, ATP-binding component BAC0400 Protein 2e-42 48