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Name : clpC (CAB346) Accession : YP_219762.1 Strain : Chlamydophila abortus S26/3 Genome accession: NC_004552 Putative virulence/resistance : Virulence Product : negative regulator of genetic competence clpc/mecb Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 399493 - 402030 bp Length : 2538 bp Strand : - Note : Similar to Bacillus subtilis negative regulator of genetic competence ClpC/MecB SWALL:CLPC_BACSU (SWALL:P37571) (810 aa) fasta scores: E(): 2.7e-125, 51.97% id in 810 aa and to Chlamydia pneumoniae probable ATP-dependent clp protease ATP-binding subunit c DNA sequence : ATGTTTGAGAAGTTTACTAACAGAGCAAAACAAGTCATTAAATTGGCTAAAAAAGAAGCTCAGAGGTTAAATCATAACTA TCTAGGCACAGAGCACATACTTCTAGGCCTACTCAAACTAGGTCAAGGCGTAGCTGTGAATGTATTGCGTAATTTAGGGG TAGACTTTGACACCGCTAAGCAAGAAGTCGAACGCTTGATCGGTTATGGACCAGAAATTCAAGTTTACGGCGATCCTGCT CTGACTGGCAGAGTGAAAAAATCTTTTGAATCAGCTAATGAAGAAGCTGGGATCTTAGAGCATAATTACGTCGGTACAGA ACACCTGCTTCTAGGTATTTTAAACCAAGCTGATGGTGTCGCTTTACAAGTTTTAGAAAATTTACATATTGATCCTAGAG AAGTTCGCAAAGAAATTCTTAAAGAATTAGAGACATTTAATCTTCAGCTCCCACCTGCATCTTCGTCTAATCCCAGAGGG AGCACGTCTTCATCTTCCAAATCTTCCTCTCTTGGTCACACTTTAGGTGGAGACAAGAGCGATAAATTATCGGCATTAAA AGCCTATGGTTATGATTTAACCGAGATGTTTCGAGAGTCTAAACTCGATCCTGTGATTGGCCGTTCTACGGAAGTTGAAC GTTTGATTTTAATCTTGTGCCGCAGAAGGAAAAACAACCCTGTACTCATCGGTGAAGCCGGTGTAGGTAAAACGGCTATT GTTGAAGGCTTAGCACAAAAAATTATTTCTAATGAAGTGCCTGATACTTTACGTAAAAAACGTTTAATCACTTTAGATCT AGCTCTAATGATCGCGGGAACAAAGTATCGCGGACAATTTGAAGAACGTATCAAAGCAGTTATGGACGAAGTCCGTAAAC ATGGCAACATTCTTTTGTTTATCGATGAGCTGCATACAATTGTCGGTGCAGGCGCTGCTGAAGGAGCTATTGATGCTTCT AACATTTTGAAGCCAGCACTAGCACGTGGTGAGATCCAGTGTATTGGGGCGACAACAATAGATGAATACCGCAAGCATAT TGAAAAAGACGCTGCTTTAGAACGTAGATTCCAGAAAATTCTTGTCCAACCGCCTAGTGTAGACGAAACTATAGAAATTC TACGTGGCTTAAAAAAGAAATATGAAGAGCATCATAATGTTTCTATTACAGAAGAAGCATTGAAAGCGGCAGCTACGCTA TCCGATCAATACGTGCATGGACGCTTCCTCCCCGATAAAGCGATTGATTTACTTGATGAGGCTGGAGCGCGAGTACGTGT AAATACCATGGATCAGCCTACAGAGTTAATGAAGCTTGAAGCTGAGATTGAGACCACGAAATTAGCTAAAGAGCAAGCTA TTGGCACTCAAGAATATGAAAAAGCTGCAGGATTGCGTGACGAAGAGAAAAAGCTTCGTGAACGTCTTTCCCATATGAAG CAAGAATGGGAGAACCACAAAGAAGAACATCAAATTCCTGTTGATGAGGAAGCTGTTGCTCAAGTGGTCTCGTTACAAAC AGGCATCCCTTCGGCACGACTTACTGAAGCTGAGAGCGAAAAGCTTTTAAAACTTGAAGATACTCTACGTAGGAAAGTCA TAGGTCAAGATCAAGCGGTAGCGAGTATCTGTCGAGCCATTCGACGCTCAAGAACAGGAATTAAAGATCCTAACCGTCCT ACAGGTTCCTTCTTATTCCTAGGACCTACTGGAGTGGGAAAAACATTACTCGCGCAACAAATCGCTATTGAGATGTTTGG TGGTGAAGATGCTTTAATTCAAGTAGACATGTCTGAGTACATGGAAAAATTTGCGGCTACAAAAATGATGGGATCACCTC CAGGCTATGTTGGTCATGAGGAAGGCGGTCATCTTACAGAACAAGTACGCCGTCGGCCTTATTGTGTTGTGCTATTCGAT GAGATTGAAAAAGCTCATCCTGACATCATGGATTTAATGTTGCAGATCTTAGAGCAAGGGCGTCTCACAGACTCTTTTGG TCGCAAGATTGATTTTCGTCATGCGATTATTATCATGACGTCAAACTTAGGCGCAGACTTAATTAAGAAAAGCGGAGAAA TCGGTTTTGGTTCTCGTTCCAATTTTGATTACAAAGTGATTCAAGAAAAAATCGAAAATGCCGTGAAAAAACATTTAAAG CCGGAATTTATCAACCGTTTAGATGAAAGTGTGATCTTCCGTCCTTTAGAAAAATCAGCGTTATCTGAAATTATCCATTT GGAAATTAACAAACTTGATTCTCGTTTGAAAAATTACCAGATGGCATTAAGTATTCCAGATTCTGTGATTTCTTTCTTAG TAACAAAAGGGCATTCTCCAGAGATGGGGGCGCGGCCTTTACGTCGGGTTATTGAACAGTATCTTGAAGATCCGCTTGCC GAACTCTTGCTGAAGGAATCTTGCCGTCAAGAAGCAAGAAAACTGCGTGCGAACCTCGTTGACGACCGTGTGACTTTCGA GCGCTATGAAGAACAAGCGGAAAATGTTGCGGCTACTATACCGAATGTGGAGTCATAG Protein sequence : MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRNLGVDFDTAKQEVERLIGYGPEIQVYGDPA LTGRVKKSFESANEEAGILEHNYVGTEHLLLGILNQADGVALQVLENLHIDPREVRKEILKELETFNLQLPPASSSNPRG STSSSSKSSSLGHTLGGDKSDKLSALKAYGYDLTEMFRESKLDPVIGRSTEVERLILILCRRRKNNPVLIGEAGVGKTAI VEGLAQKIISNEVPDTLRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDAS NILKPALARGEIQCIGATTIDEYRKHIEKDAALERRFQKILVQPPSVDETIEILRGLKKKYEEHHNVSITEEALKAAATL SDQYVHGRFLPDKAIDLLDEAGARVRVNTMDQPTELMKLEAEIETTKLAKEQAIGTQEYEKAAGLRDEEKKLRERLSHMK QEWENHKEEHQIPVDEEAVAQVVSLQTGIPSARLTEAESEKLLKLEDTLRRKVIGQDQAVASICRAIRRSRTGIKDPNRP TGSFLFLGPTGVGKTLLAQQIAIEMFGGEDALIQVDMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLFD EIEKAHPDIMDLMLQILEQGRLTDSFGRKIDFRHAIIIMTSNLGADLIKKSGEIGFGSRSNFDYKVIQEKIENAVKKHLK PEFINRLDESVIFRPLEKSALSEIIHLEINKLDSRLKNYQMALSIPDSVISFLVTKGHSPEMGARPLRRVIEQYLEDPLA ELLLKESCRQEARKLRANLVDDRVTFERYEEQAENVAATIPNVES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_219762.1 | negative regulator of genetic competence clpc/mecb | VFG0079 | Protein | 0.0 | 51 |
| clpC | YP_219762.1 | negative regulator of genetic competence clpc/mecb | VFG0080 | Protein | 2e-144 | 49 |
