Gene Information

Name : CAB153 (CAB153)
Accession : YP_219583.1
Strain : Chlamydophila abortus S26/3
Genome accession: NC_004552
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 163150 - 164310 bp
Length : 1161 bp
Strand : -
Note : Similar to Chlamydia pneumoniae sigma-54 dependent response regulator cp0162 SWALL:Q9K2D1 (EMBL:AE002177) (394 aa) fasta scores: E(): 6.5e-119, 77.97% id in 386 aa

DNA sequence : 
ATGACTATAGAAAAAGTATTGATCGTAGATGATGAGCCTCTGTTAAGAGACTTTCTTTCGGAGCTTCTTCTAACCAGAGG
ACTCTCTCCGTTTACTGCTGATAACGTGAAACAAGGCTGTCATAAAATCAAAACAGAGAAGTATGACCTCATTATTTCAG
ATATGAACATGCCTGATGGGACAGGCTTGGATATCATCAAAACCTCTAAAGAATTTGCGCCCCATACACCTGTTCTAGTG
ATCACGGCATACGGAACAATCGAAAATGCTGTAAAAGCCATGCATCATGGGGCATTTAACTACCTCACAAAGCCTTTCTC
ATCGGAAGCCTTGTTTGCTTTCATAGCCAAGGCTGAGGAGTTACAAAACCTTGTAAACGAGAATCTTTTGCTAAAATCGC
AAATTTCCTCAGAATCTCATCCTCTAATCGCCGAGAGCCCCGCAATGAAGGATTTACTATCTAAAGCAAGAAAAGCCGCG
GATAGCTCTGCCAACATTTTTATTCATGGCGAATCTGGCTGCGGGAAAGAAGTCCTTTCGTTTTTTATTCATAGAAATTC
CCCTAGAGCTTCCTGCCCCTACATCAAGGTGAATTGCGCCGCCATTCCGGAAACCTTGTTAGAATCCGAGTTTTTTGGTC
ATGAAAAAGGCGCTTTTACAGGAGCCACAGGAAAAAAGGCAGGGCGTTTTGAGCTCGCACACACCGGGACCCTTTTACTA
GATGAGATCACGGAAGTGCCTATCAATCTTCAAGCCAAGCTACTCAGAGCGATTCAAGAGAAAGAATTTGAACACCTTGG
AGGGACGAAAACCTTATCGGTAGATGTGCGTATCCTTGCTACATCTAATCGCAACCTTAAAGAAGCTGTAGATCAAAAAA
TTTTCCGACAAGATTTGTTTTATCGTCTTAACGTGATTCCCCTGTACCTCCCTCCCCTAAGAGAAAGAAAAGATGATATT
CTTCCTTTATCACAGTACTTCCTAGAGAAATTCTGTAGGTTAAATAATAAACCAATGAAAACACTTTCGGAAAGCGCCAA
ATCTGCTCTTCTCGACTATCCTTGGCCCGGGAATATCCGCGAACTCTCCAATGTATTGGAGAGGGCGGTCATCCTAGAAA
GTCCCACCCACCTGACGGAGACTATGCTCGCTCTATCCTAA

Protein sequence : 
MTIEKVLIVDDEPLLRDFLSELLLTRGLSPFTADNVKQGCHKIKTEKYDLIISDMNMPDGTGLDIIKTSKEFAPHTPVLV
ITAYGTIENAVKAMHHGAFNYLTKPFSSEALFAFIAKAEELQNLVNENLLLKSQISSESHPLIAESPAMKDLLSKARKAA
DSSANIFIHGESGCGKEVLSFFIHRNSPRASCPYIKVNCAAIPETLLESEFFGHEKGAFTGATGKKAGRFELAHTGTLLL
DEITEVPINLQAKLLRAIQEKEFEHLGGTKTLSVDVRILATSNRNLKEAVDQKIFRQDLFYRLNVIPLYLPPLRERKDDI
LPLSQYFLEKFCRLNNKPMKTLSESAKSALLDYPWPGNIRELSNVLERAVILESPTHLTETMLALS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 2e-56 42
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 2e-56 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CAB153 YP_219583.1 Fis family transcriptional regulator BAC0467 Protein 1e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CAB153 YP_219583.1 Fis family transcriptional regulator VFG1249 Protein 1e-70 46
CAB153 YP_219583.1 Fis family transcriptional regulator VFG1214 Protein 6e-66 45
CAB153 YP_219583.1 Fis family transcriptional regulator VFG0116 Protein 1e-61 44