Gene Information

Name : sgaE (TW669)
Accession : NP_789590.1
Strain : Tropheryma whipplei TW08/27
Genome accession: NC_004551
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : 5.1.3.4
Position : 761023 - 761682 bp
Length : 660 bp
Strand : -
Note : catalyzes the formation of D-xylulose 5-phosphate from L-ribulose 5-phosphate

DNA sequence :
TTGAGGGCTCGCGTTTGCGAGGGTAACCTGCGCCTTCCCAGAGAGGGCTTGGTTACTTGGACCTCCGGTAACTTGTCTGC
GAGAGATCCTGATACTGGGCTTGTTGTTATAAAACCTTCTGGGGTCCTGTATGAGAATATGACTCCGGAGGATATGGTTG
TTGTTTCCCTCGACGGTGAAATTGTTGAAGGTTCTATGCCGCCTTCGTCCGATACCGCGTCCCATTTGGGCGTGTACCGC
AAGCGGGATGATGTTGGCAGTATTGTGCACACTCATTCTAGGTATGCTACTGCATTTGCTGCGGTTGGAAAAGAGATTCC
ATGCTGTATAACTGCAGTCGCTGATGAATTTGGTGGTCCAATTCCTTGTGGGGATTATGCGGTCATTGGCGGCGAAGAGA
TTGGCGAAGAGATTGTCAGAAAGATTGGTCACTCTCCGGCTATACTCATGAAACAGCATGGAGTTTTTACCGTTGGCGCG
ACCATACACGATGCGCTCAAAGCTGCGGTTATGGTCGAGGATGTCGCAAGAACAATCTTTGCTGCGATGCAGATAGGCGA
TATTGAGCCTTTGCCTGAGGCCGAAATCAGGCGAAATTATGAGAGATATAAAAATAGATACGGGACTATGTCCGCGAGTG
ATGGGGTAAAAAGTGCCTAG

Protein sequence :
MRARVCEGNLRLPREGLVTWTSGNLSARDPDTGLVVIKPSGVLYENMTPEDMVVVSLDGEIVEGSMPPSSDTASHLGVYR
KRDDVGSIVHTHSRYATAFAAVGKEIPCCITAVADEFGGPIPCGDYAVIGGEEIGEEIVRKIGHSPAILMKQHGVFTVGA
TIHDALKAAVMVEDVARTIFAAMQIGDIEPLPEAEIRRNYERYKNRYGTMSASDGVKSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 4e-27 42