|
Name : TW070 (TW070) Accession : NP_789020.1 Strain : Tropheryma whipplei TW08/27 Genome accession: NC_004551 Putative virulence/resistance : Virulence Product : iron-siderophore uptake system integral membrane component Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0609 EC number : - Position : 60943 - 61908 bp Length : 966 bp Strand : - Note : Similar to Escherichia coli ferric enterobactin transport system permease FepD or b0590 SWALL:FEPD_ECOLI (SWALL:P23876) (334 aa) fasta scores: E(): 5.2e-33, 40% id in 305 aa DNA sequence : GTGGCAGGGCCAGTTTTTCGTTTGAGTTTAGTATTCGGCAGCGTCGTTATTGTCGGGCTTTGTTATTTGGCCCTTTTTCT CGATGGCTCAAGCGTCGGTCAATTGATTGACGCGGTGTTCGGGGGTGGAGACGACTTCAAAGATGTAGTCCTGCGAGATT TTAGAGTTCCTCGTATCTTGCTGGCAATTCTTGTTGGGGCAGCACTCTCAGTTGCTGGCGCAATTATGCAAGTGGTTACC CGGAATCCATTGGCCGATCCGGGGCTGCTTGGAATAACTCATGGGGCATATCTTGCGATTGTCCTTGGGTTTTTGGTTGG CTATGTAACGCCTTTCTGGAATTTGCTGATCGTTCCTCTGTTGGGTGCCTCAATTGCTGCTGGGCTTGTTTATTTTATTG GGAATATTGTCACTCCGGGGCAATTGATCTTGGTCGGAGTTGCATTAACCGCGCTGATTAGCGGACTGGCACGTTCGGTG GCGTTAATAAATCAGGATATTTTTGACGTGATCCGCCACTGGGCAGTTGGGTCACTCGATTACAAAAAAATCGACACGGT GTACATATCATTTCCTCTCATCCTGGCCGGAATACTAATCGCACTTATGATGATGAGCTCACTGAATGTTTTGTCAATTG ATAAAGACATATCAAAATCGCTTGGCGTTGGAAAAACTGCACTGTGGTCATATATTGCAGTTATAGCGCTTAGCGCAGGA TCTACCGCGGCAGTCGGTCCGATTAGTTTCTTGGCGCTTGCAGCGGCACATATCTCCCGGGTTATATCAGGACCCAATTT GCTCAGAATTATTCCTCTTTGTTTGATAACTGGCCCGATTGTGTTACTGACTGCAGACACGCTTGGTCGGGTTCTAACAC CAACCGGACTAGACGCTGGAGTGGTTGTGCCTTTCTTGGGTGCGCCCATTCTGATTTTCCTGTCAAGAAAGGTAAAAGTC TTTTGA Protein sequence : MAGPVFRLSLVFGSVVIVGLCYLALFLDGSSVGQLIDAVFGGGDDFKDVVLRDFRVPRILLAILVGAALSVAGAIMQVVT RNPLADPGLLGITHGAYLAIVLGFLVGYVTPFWNLLIVPLLGASIAAGLVYFIGNIVTPGQLILVGVALTALISGLARSV ALINQDIFDVIRHWAVGSLDYKKIDTVYISFPLILAGILIALMMMSSLNVLSIDKDISKSLGVGKTALWSYIAVIALSAG STAAVGPISFLALAAAHISRVISGPNLLRIIPLCLITGPIVLLTADTLGRVLTPTGLDAGVVVPFLGAPILIFLSRKVKV F |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fagA | YP_005680309.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 7e-27 | 41 |
| fagA | YP_005682399.1 | hypothetical protein | Virulence | PiCp 1 | Protein | 7e-27 | 41 |
| fagA | YP_003782432.1 | integral membrane protein | Virulence | PiCp 1 | Protein | 7e-27 | 41 |
| fagA | YP_005684490.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 7e-27 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TW070 | NP_789020.1 | iron-siderophore uptake system integral membrane component | VFG0926 | Protein | 3e-29 | 42 |
