|
Name : rph (TW640) Accession : NP_789565.1 Strain : Tropheryma whipplei TW08/27 Genome accession: NC_004551 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 727191 - 727961 bp Length : 771 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : GTGTCTGTCACCTCGCTGGCGGTGTATATGCTGTTTTGTTGTATTATTTGCTCTGTGTTGAGGAAGAATTCTAGGGCACA TGACGAAATTCGACCCGTAAAAATTATCCGCGGGTGGAATATTTATGCAGAGGGATCAGCCCTAATTGCTTTTGGCAATA CCAGGGTTCTTTGTAATGCAACCTTTCAGCGCGGAGTTCCGCCGTTTTTACGCGGACAGAGATCTGGATGGATAACGGCA GAATATGCTATGCTCCCGCGATCTGGTACCGAGCGATCTGACCGTGAATCTGTTAAGGGGAAAATTAGCGGTCGCAGTCA TGAAATCAGTCGCCTCATAGGCCGAAGTATGCGTGCAATTTTGGATCGGTATGCTCTGGAGGAGAATACCATTATCCTAG ATTGTGATGTCCTACAGGCCGACGGCGGGACGCGCACCGCCGCTATAACCGGTTCGTATATTGCGCTTTACGATGCCCTT GTCTGGGCTAAAAATCAAAAGATACTTTCAAAGCATCCTCTGACTGATTCTGTATCCGCTGTGTCTGTTGGGCTAGTCGG CGACCAGATTTTTCTAGACCTGGATTATTCGGAGGACTCAAATGCACAGGCTGACATTAATCTTGTTTTTACTGGAAGCG GTAAATTAGTAGAGATTCAGGGTACTGCAGAAAAATCACCCTTTTCGTATGGACAGTTTGAGCAGATGATGGAACTTGCC AAAACAGGTTGCCAAGCCCTAAAGGAGATACAGGCCGCTTCATTGGATTAA Protein sequence : MSVTSLAVYMLFCCIICSVLRKNSRAHDEIRPVKIIRGWNIYAEGSALIAFGNTRVLCNATFQRGVPPFLRGQRSGWITA EYAMLPRSGTERSDRESVKGKISGRSHEISRLIGRSMRAILDRYALEENTIILDCDVLQADGGTRTAAITGSYIALYDAL VWAKNQKILSKHPLTDSVSAVSVGLVGDQIFLDLDYSEDSNAQADINLVFTGSGKLVEIQGTAEKSPFSYGQFEQMMELA KTGCQALKEIQAASLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 3e-55 | 51 |
