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Name : TW506 (TW506) Accession : NP_789435.1 Strain : Tropheryma whipplei TW08/27 Genome accession: NC_004551 Putative virulence/resistance : Unknown Product : pyridoxal biosynthesis lyase PdxS Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0214 EC number : - Position : 544033 - 544896 bp Length : 864 bp Strand : - Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate DNA sequence : ATGGGGCTTGACAATTTAAAGGTAGGTCTTGCGCAAATGCTCAAAGGGGGCGTAATAATGGATGTTGTTACACCCGATCA GGCAAAGATAGCCGAGGATGCTGGCGCTGTTGCTGTTATGGCATTGGAAAAAATACCGTCTGATATTCGTGCTTCTGGTG GCGTGTCGCGTATGAGCGATCCCGGTTTGATTGAGCGGGTAATGGATTCAGTGTCAATTCCTGTTATGGCGAAAGTAAGG ATCGGTCATTTTGCCGAAGCGCAAATCCTTCAGTCACTAAAAGTTGATTACATAGATGAATCGGAAGTTTTGTCTGTTGC GGATTCTTCGTATCATATCGACAAACGAAAATTTACAGTTCCTTTTGTTTGTGGTGCGACCAATCTCGGCGAAGCCTTAC GTCGTATTTCGGAAGGCGCTTCTATGATCAGGTCAAAAGGGGAGGCTGGTACGGGCGATATTGCGCAGGCTACAAAACAT ATACGTGCTATCCTGTCTGAGATATCTGCGTTGACACAAGCGCGGGAAGATGAACTTCCTGCCAGGGCCAGGGAGCTCGG CGCGCCAATTGATCTTGTGCGAGAGACAGCCAGGCTTGGCAGATTGCCGGTTGTTTTGTTTACTGCCGGCGGCATTGCAA CACCAGCGGATTCTTCGCTTGTTATGCAGCTTGGATCTGACGGGGTATTTGTTGGTTCGGGAATTTTTAAATCTGAAGAT CCAAAAGCCTATGCCGCAGCAATTGTTCAGGCGACTGCTCAATACGATGATGCGGATCTCCTGGCCCGCGTGTCGCGTAA TTTAGGTCAGGCTATGCCCGGTGTTTCCAATCTTGATGTGCGTTTTTCGAGTCGGGGTGTGTAA Protein sequence : MGLDNLKVGLAQMLKGGVIMDVVTPDQAKIAEDAGAVAVMALEKIPSDIRASGGVSRMSDPGLIERVMDSVSIPVMAKVR IGHFAEAQILQSLKVDYIDESEVLSVADSSYHIDKRKFTVPFVCGATNLGEALRRISEGASMIRSKGEAGTGDIAQATKH IRAILSEISALTQAREDELPARARELGAPIDLVRETARLGRLPVVLFTAGGIATPADSSLVMQLGSDGVFVGSGIFKSED PKAYAAAIVQATAQYDDADLLARVSRNLGQAMPGVSNLDVRFSSRGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pdxS | YP_005137204.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 3e-84 | 69 |
| DIP0227 | NP_938620.1 | pyridoxal biosynthesis lyase PdxS | Not tested | Not named | Protein | 4e-84 | 69 |
| pdxS | YP_005141805.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 3e-84 | 69 |
