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Name : rplS (TW308) Accession : NP_789244.1 Strain : Tropheryma whipplei TW08/27 Genome accession: NC_004551 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 343681 - 344028 bp Length : 348 bp Strand : + Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : GTGCATGCTCTTGACGCTCTTGACGCTCTTTCGATAAAGGCTGATATTCCCGATTTTTCCCCCGGTGACACTGTTAGGGT CTATGTAAATATAACTGAGGGTGACAGATCTCGTGTTCAGGTTTTTCAAGGGGTAGTTATTGCCCGACGTGGCTTTGGCG TTCGTCAGACGTTTACTGTGCGTAAGATAAGCTTCCAGGTGGGTGTGGAGAGGATATTTCCCTTACATTCTCCTTCTATA AACCGGATAGAGGTTGTTACCAAGGGAAGTGTTCGCCGTGCGAAGCTGTACTACATTCGCAAGCTTAGGGGTAAAAAGGC AAAGGTCAAACAGAAGCGTGAACTGTGA Protein sequence : MHALDALDALSIKADIPDFSPGDTVRVYVNITEGDRSRVQVFQGVVIARRGFGVRQTFTVRKISFQVGVERIFPLHSPSI NRIEVVTKGSVRRAKLYYIRKLRGKKAKVKQKREL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 2e-29 | 57 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 4e-21 | 47 |
