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Name : TW150 (TW150) Accession : NP_789093.1 Strain : Tropheryma whipplei TW08/27 Genome accession: NC_004551 Putative virulence/resistance : Unknown Product : ABC transporter system integral membrane subunit Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1173 EC number : - Position : 164075 - 165040 bp Length : 966 bp Strand : + Note : Similar to Corynebacterium glutamicum ABC-type transporter, permease components cgl1992 SWALL:BAB99385 (EMBL:AP005280) (333 aa) fasta scores: E(): 2.3e-50, 45.77% id in 308 aa, and to Bacillus subtilis oligopeptide transport system permease OppC or Spo0KC DNA sequence : GTGAGCAATAATAAATCCCTTGATGGCTATGCCAATCCGGTCGAGCATTATGTTGCCCCGTTTGACGAGGATGATTTTTC CGCACCCCCGGATACATCTGTTGGCAGACGTGCTTCCAAACTGCGCGATATATGGGTTTATCTCAGGCGCAGGTTTGCAT TCTGGTTTTCTGTAGTTGTGCTTTTTACCCTCACCCTTGCTGCTCTTTTTCCGGGGCTATTTACACGTGTTCCGCCGAAC AGCGATTGTTATTTGAAAAATTCGAACGGCGGACCAACAGGCGAGCATATTCTCGGGTTTACAAAACAGGGGTGCGATGT CTTTTCTCGCATAGTGCATGGCGCCTCGACATCCCTATCGGTTGGGCTACTTACCCTTGCATTTGCTTTGGCAATAGGGG TTACGATCGGTGCCCTCGCTGGATTTTTCGGTGGCTGGGTTGATGCAATTATTTCGAGGGCTGCTGATATATTCTTCGTT ATTCCGTTTCTTGTTGCTGCAATCGTTGTTATGAGTGCGTTTTCGTCATTCCGTAGTGTTTTTACAATTGCACTTGTTCT TGCAGTCTTCGGCTGGCCCGGGACAGCGCGTTTGGTAAGAAGTGAGGTTTATAGAGTAAAAAACCTTGAGTTTGTTTTGG CCGCTCATTGCTTGGGTCAAAGAAAATGGGGTATTTTGATGAAACATATAATCCCGAATTCCCTAAGCCCTATCTATTCC CTTGCCGCTATCAGTGTTGGTTATGCCATTATCTCCGAGACTGTGCTTTCTTTTCTTGGCCTTGGTCTTCCATCAAATGT GATGAGTTGGGGTAATGATATAGCGTCTGCACAGCCTGATTTACGCAATAACCCCATGACTCTTTTCTGGCCCTCTTTGG TCCTGTCCGTCACGGTACTTGCCTTTACACTTCTTGGCGATGTAATACGCAAAGCCAATAATCCAGCTGAAAGATCCAAG GGATGA Protein sequence : MSNNKSLDGYANPVEHYVAPFDEDDFSAPPDTSVGRRASKLRDIWVYLRRRFAFWFSVVVLFTLTLAALFPGLFTRVPPN SDCYLKNSNGGPTGEHILGFTKQGCDVFSRIVHGASTSLSVGLLTLAFALAIGVTIGALAGFFGGWVDAIISRAADIFFV IPFLVAAIVVMSAFSSFRSVFTIALVLAVFGWPGTARLVRSEVYRVKNLEFVLAAHCLGQRKWGILMKHIIPNSLSPIYS LAAISVGYAIISETVLSFLGLGLPSNVMSWGNDIASAQPDLRNNPMTLFWPSLVLSVTVLAFTLLGDVIRKANNPAERSK G |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppC | YP_005160016.1 | putative peptide transport system membrane protein | Not tested | Not named | Protein | 2e-58 | 44 |
