|
Name : TW149 (TW149) Accession : NP_789092.1 Strain : Tropheryma whipplei TW08/27 Genome accession: NC_004551 Putative virulence/resistance : Unknown Product : ABC transporter integral membrane subunit Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0601 EC number : - Position : 163138 - 164073 bp Length : 936 bp Strand : + Note : Similar to Streptomyces coelicolor peptide transport system integral membrane protein SCO5118 or SC9E12.03 SWALL:Q9F352 (EMBL:AL391751) (307 aa) fasta scores: E(): 6.3e-45, 42.15% id in 306 aa, and to Bacillus subtilis oligopeptide transport system permea DNA sequence : TTGGGGCGCTATGTCTTGTTCCGGCTCCTGCAGTTTGTTCCGGTGTTCGTTGGTGCGACATTCCTGATTTATCTTCTTGT ATTTCTCATGCCTGGGGATCCCATTGCTGCACTTTTCGGCGATAAAAGGCCGTCGCCTGATGTTGTTGCGGCAATTCGTG AGCAGTACAACCTTGATAAACCGTTCATTGTCCAATATTTCATTTGGTTTTCTGGCATACTCACGGGCAATATGGGTGTT ACATTTTCTGGCCAGAGTGTAACCGAGGTTCTGGGCAGTACAATTCCAGTCAGTGCGCAACTTGGGTTTATGGCCCTTGT TATACAACTTCTTCTGGGTCTTTCGGTTGGCCTAATAGCTGGGCTGCGGCCGTATAGATTATTTGACACAACGAGCACTC TGTTCTTACTTGCCCTTGTTTCAATACCATCTTTTGTGCTCGCATTTTTGCTTCAGTTTTTTATAGGAATTCAGCTTCGT CTTCTGCCTGTAACGGTCGGTGGTGACACCAGCTTTTATCGAATGCTTCTGCCCGCATTCTCGCTCGGACTTCTCGGTAT GGTTGGGTATGCCCGAGTTTTTAGGGGTGAAATCCTCAAAACCCGCGCACAAGATTTCGTTAATTTCGCTTACAGTAAAG GTCTCTCCAAAGCCCGGGTTATTTTCGGTCATATAGTCCGCAATAGCCTCCTAGTTGTTGTGACTCTAATTGGTTTTGAT TTGGCAGGTCTAATCGGCGGTGCGATTATAACTGAAGGCATATTCAATGTCCCAGGGGTTGGCAATGTGTTCTACCAGGC GACAATTCGCGGAGAGGGTCCAACGATTGTTTCGTTTTCTGCAGTTTTTGTAATTGCCTTTATGCTTGCGAATCTCTTGG TTGATATCAGTTATTCCTACATCGACCCGAGAATAAGGCTGTCTGGAAGAAAATAA Protein sequence : MGRYVLFRLLQFVPVFVGATFLIYLLVFLMPGDPIAALFGDKRPSPDVVAAIREQYNLDKPFIVQYFIWFSGILTGNMGV TFSGQSVTEVLGSTIPVSAQLGFMALVIQLLLGLSVGLIAGLRPYRLFDTTSTLFLLALVSIPSFVLAFLLQFFIGIQLR LLPVTVGGDTSFYRMLLPAFSLGLLGMVGYARVFRGEILKTRAQDFVNFAYSKGLSKARVIFGHIVRNSLLVVVTLIGFD LAGLIGGAIITEGIFNVPGVGNVFYQATIRGEGPTIVSFSAVFVIAFMLANLLVDISYSYIDPRIRLSGRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDBH8_0923 | YP_005160015.1 | putative peptide transport system membrane protein | Not tested | Not named | Protein | 1e-58 | 47 |
