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Name : ECA0942 (ECA0942) Accession : YP_049051.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Virulence Product : outer membrane usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 1054808 - 1057300 bp Length : 2493 bp Strand : - Note : Similar to Photorhabdus luminescens MrfC SWALL:Q93MT4 (EMBL:AF396083) (851 aa) fasta scores: E(): 6.4e-137, 43.95% id in 810 aa, and to Proteus mirabilis outer membrane usher protein PmfC precursor pmfC SWALL:PMFC_PROMI (SWALL:P53514) (828 aa) fasta score DNA sequence : ATGAAGAACATTACACTCAAAGAAAAAATACAACCCGCATTATTTCACTATGGTATTTTTATTTTTTCTTTGAGTACAAC ATCGCTCAGTGCAACGGAATTTAACATTAATGTACTGGATGTCGATGAACGTAGTGACATTGATCTTAGCCATTTTTCCG ACCCCGAATACGTCACGCCTGGCACCTATCTTTTATCGATAAAAGTAAACGCACGTGAAATACAGCAGCAGATGATTAGC TACCTGCCGGAAGGTAATCATCGCCCTCGACCAACGGCCTGCCTCTCGACTGAACTCGTCGATAAACTGGCACTGAAAAA AGAAGCACGCGACCAAGTTGAATTATGGAATAACGGCACGTGTGTCGATCTGACGCCAATTGCTGGCGTCAAAATATCGA ATCAAATAGGCATGGGAACGCTAAATATTACCATTCCTCAAGCCTGGCTGGTGTACAGCGATCGCAACTGGATTCCGCCC GAACAATGGGATCACGGCATCAACGGCGCGCTGCTAGATTATAACCTCGTCGGGAACGTACGCCGTGATACCAATGGCAG AGGCACATCACACTATCTCAGTAGCTACGGCACGACCGGATTTAATCAGGGAGCCTGGCGCTACCGTGCCGATTACCGCT ATTTTCTGCAAAAATCGCGCAACTCGAATCGCGATAGCTTCTCGTGGGATCAGTTTTACGCTTATCGTCCGCTTCCCACC CTGTCAGCCGATCTCAAGCTGGGTGAAATGTATTTCAGCAGTAATCTGTTTGATAGCTATCGCTTTACCGGCGCGTCATT AGCCAACAACGAGAACATGCTTCCCCCTTCGTTGCGTGGCTACGCGCCCGAAGTTCGCGGCGTCGCCAAATCAAACGCAA CAGTGACCGTTACGCAAAATGGCAGGCTGATCTATGAAACCACCGTTCCTGCTGGCCCTTTTGCGATTCAGGATATGAAA AACGGCGTCAGCGGGACGTTGGATGTCCGTGTGACGGAAGAAGACGGTACGGTAACGACGTTCCAGACCGAGTCGGCCAA CCTGCCTTACCTAACGCGCCCCGGACACGTGCAGTACAAACTCGCCGCAGGTAAACCCTCGAACACCAACCATCGTCTAC AAGGCCCAGCCTTTTCTGCTGCCGAAGCCTCATGGGGATTATCCAACGCGTGGTCGGTGTACGGCGGCAGCATTTTGTCC AATGGCTACCAGTCTTGGTCGGCAGGTATAGGGAAAAACCTCTACCTGCTGGGCGCACTGTCCGCAGATATCACACAGTC GCGCGCGACGCTTCCGACAACGTCCTCGTCGCAAATGGGGCATGCGTTTTCGCTTAACTGGTCTAAATATTTCAATTCGA TCGATAGCCAGATCAGTTTTGCCGGCTATCGCTTTTCAGAGAAGACCTACATGAGCATGGCGCAGTATCTCTATGCGCTG AATCTTGATAACCGCTATCGCAATGAAAAAGAGCGCTACACCATTACGCTCTCAAAAAACTTCGCGACGCAAGAATCATC CTCGCTGCTGAACGGGCTATCGACCTACGTTACCTATACGCGCCAAACCTACTGGAATGAAGCCGAGCAGGATCGCTACG GAATTTCGCTCAACAAGTACCTTGATATCGGCGCATTTAAAGGAATTTCTGCGAACTTATCGGCCTACCGCACCGAATTC AACCGCCGCACCGATGACAGCCTGTATCTGAGTTTTTCTATTCCACTCGGAGAAAAAGATCGCCTGAGCTACAGCATGGG ACGCTATAACGACGGCAGCAATCAAGCGCTGACCTATTCCAATAACGCCGATCCGCGTCGTACCTGGAATCTGAGCACTC GGCACGACAGCAAAGAAAACATCTACCTGAGTGGCAACTATACCCATCTGGCACCGATGACGGATGCCACCGTGGGCGTC GCCTGGCAGCAAGACCGCTATACCTACCTGAACGGCTCACTGCGCGGAGGGATTACCGCAACCCGCCACGGCGTCGCGGC ACATCCGAAAGGCAATCAGGGCGGCACTCGCATCATGGTCGATACGGAACAAGCGGGCGTACCGTTCTCTGGCAGTCAGG TCGAAACTAACCGCTATGGCCTGGCCGTGATTGCTGGTAGCAGTAGCTACTACGATGTGTCGACCCGCATCGATATGCAG AAATTACCGCAAAATATTGAAGCCATGACGACGGTGGTTCAGGGCACGCTGACCGAAGGCGCGATTGGCTACCGCAAATT CGACGTAGTTAGCGGAGCAAAAGTCATGGCACACATTGCGCTGGCCGATGGCAAATATCCTCCGTTCGCCGCCCAGATCA AGAACCAGAAAGGCCGCGATATCGCCATGGTTACCAACGGTGGACAAGCCTATATCACGGGCGTATCACCTGACGAAACG CTGTCCGTCATCTGGGAGGGGAGAACCCAGTGTTCCATCACCCTGCCCGCCACCTTAAATCACCTTGATGCGCTGCTGCT TCCCTGTAAATAA Protein sequence : MKNITLKEKIQPALFHYGIFIFSLSTTSLSATEFNINVLDVDERSDIDLSHFSDPEYVTPGTYLLSIKVNAREIQQQMIS YLPEGNHRPRPTACLSTELVDKLALKKEARDQVELWNNGTCVDLTPIAGVKISNQIGMGTLNITIPQAWLVYSDRNWIPP EQWDHGINGALLDYNLVGNVRRDTNGRGTSHYLSSYGTTGFNQGAWRYRADYRYFLQKSRNSNRDSFSWDQFYAYRPLPT LSADLKLGEMYFSSNLFDSYRFTGASLANNENMLPPSLRGYAPEVRGVAKSNATVTVTQNGRLIYETTVPAGPFAIQDMK NGVSGTLDVRVTEEDGTVTTFQTESANLPYLTRPGHVQYKLAAGKPSNTNHRLQGPAFSAAEASWGLSNAWSVYGGSILS NGYQSWSAGIGKNLYLLGALSADITQSRATLPTTSSSQMGHAFSLNWSKYFNSIDSQISFAGYRFSEKTYMSMAQYLYAL NLDNRYRNEKERYTITLSKNFATQESSSLLNGLSTYVTYTRQTYWNEAEQDRYGISLNKYLDIGAFKGISANLSAYRTEF NRRTDDSLYLSFSIPLGEKDRLSYSMGRYNDGSNQALTYSNNADPRRTWNLSTRHDSKENIYLSGNYTHLAPMTDATVGV AWQQDRYTYLNGSLRGGITATRHGVAAHPKGNQGGTRIMVDTEQAGVPFSGSQVETNRYGLAVIAGSSSYYDVSTRIDMQ KLPQNIEAMTTVVQGTLTEGAIGYRKFDVVSGAKVMAHIALADGKYPPFAAQIKNQKGRDIAMVTNGGQAYITGVSPDET LSVIWEGRTQCSITLPATLNHLDALLLPCK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 2e-159 | 43 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 2e-158 | 43 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 2e-158 | 43 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 4e-159 | 43 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 3e-159 | 43 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 2e-159 | 43 |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 1e-163 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECA0942 | YP_049051.1 | outer membrane usher protein | VFG1548 | Protein | 9e-160 | 43 |
| ECA0942 | YP_049051.1 | outer membrane usher protein | VFG0884 | Protein | 2e-159 | 43 |
| ECA0942 | YP_049051.1 | outer membrane usher protein | VFG0895 | Protein | 1e-159 | 43 |
