|
Name : tktA1 (ECA0861) Accession : YP_048970.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 953644 - 955638 bp Length : 1995 bp Strand : - Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGTCCTCTCGTAAAGAACTTGCCAATGCTATCCGCGCGCTGAGCATGGATGGGGTGCAGAAAGCCAAATCCGGTCACCC GGGCGCACCGATGGGCATGGCCGATATCGCCGAAGTGCTGTGGCGTGATTATCTCAACCATAATCCGGCCAACCCCAACT GGGCCAACCGCGACCGCTTCGTGCTGTCCAACGGTCATGCGTCCATGCTGATTTACAGCCTGCTGCATCTCTCCGGTTAT GACCTGCCGATTGAAGAACTGAAAAACTTCCGTCAGATGCATTCCAAAACTCCGGGTCACCCTGAATACGGCTACACCGC CGGCGTCGAAACCACCACCGGCCCGCTGGGTCAGGGTGTTGCCAATGCGGTGGGGATGGCGATTGCCGAGCGCACGCTGG CGGCGCAGTTCAACCGCCCGGGCCACGACATTGTTAACCATCACACCTACACCTTCCTCGGTGACGGCTGCATGATGGAA GGGATTTCTCACGAAGTCTGCTCGCTGGCAGGCACCATGAAGCTCGGCAAACTGACCGCGTTTTATGATGACAACGGCAT CTCCATCGACGGTCACGTAGAAGGCTGGTTTACTGATGATACCGCCGCCCGCTTTGAAGCCTACGGCTGGCACGTGGTGC GCGGCGTGGACGGTCACGATGCGGATGCCATCAAACGCGCCATCGGCGAAGCACAGCTGGTGACCGACAAACCGTCGCTG CTGATGTGCAAAACTGTGATTGGCTTCGGTTCACCGAATAAGGCCGGCACGCACGACTCGCACGGTGCGCCGTTGGGCCA GGCGGAAGTCGCGGCTTCCCGCGAACAGCTGGGCTGGACGCACGCGCCGTTTGATATTCCGGCGGATATTTATGCCGCCT GGGACGCCAAACCCGCCGGTCAGCGTAAGGAAGCCGCCTGGGATGAGGCCTTTTCTGCCTACGCCAGCGCGTACCCTGAA CTGGCTGCCGAATTCACACGCCGTACCGGCGGTGAACTGCCGACCCACTGGCAGGCAGATGCACAGAAATTCATCGAGGA TTTGCAGGCTAATCCGGCGAAAATCGCCAGCCGTAAAGCCTCACAGAACGCGCTGGAAGCCTATGGCAAACTGCTGCCGG AATTCCTTGGCGGCTCTGCCGACCTGGCTCCGAGCAACCTGACCATCTGGTCCGGCTCGGTATCGCTGGATAAAGACCAC GCGGGTAACTATATCCACTACGGTGTGCGCGAGTTCGGTATGACCGCCATTGCCAACGGGATTGCGCTGCACGGTGGCTT TGTGCCGTATACCGCGACTTTCCTGATGTTTGTGGAATACGCGCGTAACGCCGTGCGTATGGCCGCGCTGATGAAAATCC GCAGCATCTACGTTTACACCCACGACTCCATCGGTCTGGGGGAAGACGGCCCGACGCACCAGCCGGTTGAACAGCTGGCC AGCCTGCGCGTAACGCCGAACATGAGCAACTGGCGTCCGGCAGACCAGGTGGAAACGGCGGTGGCGTGGAAATATGCCAT CGAGCGTCAGGACGGTCCGACGTCACTTATCCTGTCGCGTCAGAATCTGGCGCAGCAGACGCGTACCGCAGAACAACTGG CGAACGTGGTGAAAGGCGGGTACGTGCTGAAAGACAGCGACGGCCAGCCGGAACTCATCCTGATTGCCACCGGTTCTGAA GTCGAACTGGCTGTCGGTGCGTATGACAAGCTGACTGCCGCCGGCCGCAAGGTGCGCGTGGTGTCGATGCCGTCAACGGA TGCGTTCGACAAGCAGGACGCCGCCTACCGTGAAGCGGTGCTGCCGAAAGCGGTATCGGCGCGCGTAGCCATTGAAGCGG GTATTGCAGACTACTGGTTCAAGTATGTCGGCCTGAACGGCGCAATTGTCGGTATGACGAGCTTCGGCGAATCGGCTCCG GCTGAACTGCTGTTCGAAGCATTCGGCTTCACTGTCGATAACGTGGTCGAAAAAGCGCAGGCGCTGCTGAAGTAA Protein sequence : MSSRKELANAIRALSMDGVQKAKSGHPGAPMGMADIAEVLWRDYLNHNPANPNWANRDRFVLSNGHASMLIYSLLHLSGY DLPIEELKNFRQMHSKTPGHPEYGYTAGVETTTGPLGQGVANAVGMAIAERTLAAQFNRPGHDIVNHHTYTFLGDGCMME GISHEVCSLAGTMKLGKLTAFYDDNGISIDGHVEGWFTDDTAARFEAYGWHVVRGVDGHDADAIKRAIGEAQLVTDKPSL LMCKTVIGFGSPNKAGTHDSHGAPLGQAEVAASREQLGWTHAPFDIPADIYAAWDAKPAGQRKEAAWDEAFSAYASAYPE LAAEFTRRTGGELPTHWQADAQKFIEDLQANPAKIASRKASQNALEAYGKLLPEFLGGSADLAPSNLTIWSGSVSLDKDH AGNYIHYGVREFGMTAIANGIALHGGFVPYTATFLMFVEYARNAVRMAALMKIRSIYVYTHDSIGLGEDGPTHQPVEQLA SLRVTPNMSNWRPADQVETAVAWKYAIERQDGPTSLILSRQNLAQQTRTAEQLANVVKGGYVLKDSDGQPELILIATGSE VELAVGAYDKLTAAGRKVRVVSMPSTDAFDKQDAAYREAVLPKAVSARVAIEAGIADYWFKYVGLNGAIVGMTSFGESAP AELLFEAFGFTVDNVVEKAQALLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 82 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 69 |
