Gene Information

Name : qseB (ECA0008)
Accession : YP_048140.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Virulence
Product : two-component system response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 9014 - 9676 bp
Length : 663 bp
Strand : -
Note : Similar to Escherichia coli transcriptional regulatory protein QseB SWALL:QSEB_ECOLI (SWALL:P52076) (219 aa) fasta scores: E(): 3.1e-59, 68.34% id in 218 aa

DNA sequence : 
ATGAGAGTATTGTTAATCGAAGACGATCGCCTGATCGGTGATGGCCTAAAAGCTGGGCTTAACAAACTGGGCTTTAATAT
TGATTGGTTTACGGAAGGTAAAGCGGGCGCTACCGCGTTGAAGGCCGCCCCTTATGATGCAGTGGTGCTCGATCTCAGCC
TGCCGGGCATGGACGGCATGGATATCCTGCGCCAGTGGCGTCAGGCTGGACATGACGAACCGGTGCTGATTCTGACCGCC
CGCGATGCGCTGGAACAGCGCGTAGAAGGATTGCAGCAAGGAGCAGATGATTATTTATGTAAGCCTTTTGCGCTGACAGA
AGTTGCCGCTCGCCTGCAGGCGCTGATTCGTCGCCGTCACGGCCAACTCCAACCCGTATTAACACATGGCGCTGTTTCCC
TTGAGCCTAGCTCACGGAGCGTCACGCTTAACAGTGAGCCGTTGATACTAAAATCCCGCGAGCTGGCGCTGTTGGAACTG
TTCTTGCTCAATCCGAACCGCGTACTCACGCGCGCGCAGTTGGAAGAGAAGCTCTACGGCTGGGATGATGATGTCTCCAG
CAATGCGGTAGAAGTCCATATCCACCACCTGCGCAAAAAGCTGGGCAGCGGGTTTATTCGTACCGTGCATGGCGTTGGCT
ATATTCTGGGAGATGCACCATGA

Protein sequence : 
MRVLLIEDDRLIGDGLKAGLNKLGFNIDWFTEGKAGATALKAAPYDAVVLDLSLPGMDGMDILRQWRQAGHDEPVLILTA
RDALEQRVEGLQQGADDYLCKPFALTEVAARLQALIRRRHGQLQPVLTHGAVSLEPSSRSVTLNSEPLILKSRELALLEL
FLLNPNRVLTRAQLEEKLYGWDDDVSSNAVEVHIHHLRKKLGSGFIRTVHGVGYILGDAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-37 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_048140.1 two-component system response regulator BAC0487 Protein 6e-36 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_048140.1 two-component system response regulator VFG0473 Protein 6e-33 42