Gene Information

Name : ECA0617 (ECA0617)
Accession : YP_048734.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Unknown
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1309
EC number : -
Position : 690300 - 690875 bp
Length : 576 bp
Strand : -
Note : Similar to Yersinia pestis TetR-family regulatory protein ypo0341 SWALL:Q8ZIZ3 (EMBL:AJ414142) (191 aa) fasta scores: E(): 4.5e-49, 68.58% id in 191 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri protein YjdC SWALL:AAN45707 (EMBL:

DNA sequence :
ATGCAACGGGAAGATGTTCTTGAACATGCGCTTACTCTGCTGGAGCAGCACGGATTCGCCATGACGACGCTGGATATGCT
GGCGGAGAAACTGGGGGTTCCTGTCGAGGAACTGACACCGTTCTGGCCGGATCGGGAGGCGCTGCTGTACGACGGCCTGC
GTCACCACAGCCAACAGGTCGATACTTGGCGGCGTCAGTTGCTACTGGACGATGAGAAAAGTATCGAACAAAAGCTGCTG
GCACGCTATCAGGTGCTGCATGAGTCTGTGAACAAACAGCGTTATCCGGGTTGCTTGTTTATCGCAGCGTGCAGCTTCTT
CCCTGATATCAATCACCCTATCCACCAGATCGCGGAACAACAGAAGCTGGCTTCCTACAGCTACACCCGCGATTTGCTGG
AAGAGCTAGAAACCGACGATCCCGAGATGGTCGCACAACAGATGGAACTGATTCTGGAAGGCTGCCTGAGCAACCTGCTT
GTCAAGCATCAGGCCGCCAGCATCGCCACCGCACAACGGCTAGCAGAGGATGTATTACGCTTCGCGTTGTGCCGCAAGGG
TGGGGCGTTGACCTAA

Protein sequence :
MQREDVLEHALTLLEQHGFAMTTLDMLAEKLGVPVEELTPFWPDREALLYDGLRHHSQQVDTWRRQLLLDDEKSIEQKLL
ARYQVLHESVNKQRYPGCLFIAACSFFPDINHPIHQIAEQQKLASYSYTRDLLEELETDDPEMVAQQMELILEGCLSNLL
VKHQAASIATAQRLAEDVLRFALCRKGGALT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0341 CAF28570.1 putative transcription regulator Not tested YAPI Protein 8e-58 69