Gene Information

Name : ECA0576 (ECA0576)
Accession : YP_048692.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 639329 - 639733 bp
Length : 405 bp
Strand : +
Note : Similar to Pseudomonas aeruginosa hypothetical protein SWALL:AAN62274 (EMBL:AF440524) (145 aa) fasta scores: E(): 9e-09, 39.65% id in 116 aa, and to Salmonella typhi hypothetical protein sty4575 sty4575 or t4272 SWALL:Q8Z1J0 (EMBL:AL627282) (130 aa) fasta

DNA sequence :
ATGTGCAGCAAAATAGCCGTTTTTCTTTTTTTACTCTCACCTGCGCCATTACTGGCCAATCCCGTTGTTTATACCGACCA
GCAACATCCTCCTACCAATCTTACCCCCGAGACTCAGATAGTCTGGCTGGATGCTCCGGAACGGTTGCAGCGTTCCGTGT
TTGGCGAGTTTCCCGCATCGATGGAACAAGCGACAGTACAAGCTCAGGTTGTTATGCGCTCCCCGAAGTGGCAACAGCAT
GAGAATGACCTGCAAACGGCCTATCGTGGTGTGGTGCATGCATGGGAAATTGGCGTGCGCAAATATCCTGCTGTTGTTTT
TGACGATCGCGACGTGGTGTACGGTACTGCTGATGTTGCCATGGCTATCGCATATAAAATGCAAGAAGGGGGTAGCCATG
AGTAA

Protein sequence :
MCSKIAVFLFLLSPAPLLANPVVYTDQQHPPTNLTPETQIVWLDAPERLQRSVFGEFPASMEQATVQAQVVMRSPKWQQH
ENDLQTAYRGVVHAWEIGVRKYPAVVFDDRDVVYGTADVAMAIAYKMQEGGSHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAX39457.1 unknown Not tested Hrp PAI Protein 3e-18 52
STY4575 NP_458660.1 hypothetical protein Not tested SPI-7 Protein 5e-22 49
t4272 NP_807870.1 hypothetical protein Not tested SPI-7 Protein 5e-22 49
YpsIP31758_3702 YP_001402656.1 hypothetical protein Not tested YAPI Protein 1e-16 46
api53 CAF28527.1 hypothetical protein Not tested YAPI Protein 9e-17 46