|
Name : ECA0570 (ECA0570) Accession : YP_048686.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 632961 - 634493 bp Length : 1533 bp Strand : + Note : Similar to Pseudomonas aeruginosa hypothetical protein SWALL:AAN62143 (EMBL:AF440523) (472 aa) fasta scores: E(): 5.8e-46, 41.17% id in 493 aa, and to Salmonella typhi exported protein sty4570 SWALL:Q8Z1J5 (EMBL:AL627282) (492 aa) fasta scores: E(): 5e-67 DNA sequence : ATGCAAATTAAGTCCAATACGCTGGTCAAAGTGATTGTGCCATCGGTACTGGCCATCGGTGCATTGATTGGCGTAAAGAG TTGCCAGAGTCCGGATCAGGCGCAGAGTACTGCTGATACCGCTAAGACGACGCTGGGATTATCTCAGGATGAACTTAAAG CGTTAGGCGTCGCCGGCGATACGCCAGAGGATACGTTACGTACGGTTGTTGGCTCGTTGAACCAGGTACGCAGTGATTTG GGCAAGCTCAGCCAACAAAATGAGGACCTGAAAAAACAAAATGATGTGTTGACCCGACGTAGTACCGATGTATCCGGACA AGTGAATGAGGCCGTTTCAGGTGTGCAACAGTCCTACGACACGCAACAAAAGCGCTTACAGGATGAGCAGTTACGGATAC AGAATAAAATCCAGGAACTGACCGATAAACTGGCTAATACGATGAGTAATCCCGGTGGCCATATTAGCGGAGGGAGTAAC TACCTGGGATCCTCAGGGCACGGTGATATCCCTCTGGGGTTAGGGTTGGACGGCATGGGAAGTGGTACCACTGGCACCCA GTCACAAGGTGCAGATGGCCTGATATGGGTACAACCAAAAGACCAGAAGCCAACGGATCCTAATAAGACTTCCAGTGCTG GCATGCCAGCGCTCCCTCAGTTTCCTACCTCCTTTCTTAACGACAATGAGCTAACGCGCCAGAAAGCGGCGTATGAGCAA CAGGTGAAAGGGTACTCGAACGAAAAAAATGAGGTTACAGCAGAGCCCGTTTACACCTTACCAGAAAATTCCACGCTGAT CGGCAGCCGGGCAATGACGGCGCTGTTGGGGCGCGTTCCGATTAACGGCACGGTGACTGACCCCTATCCCTTCAAGGTAC TCATTGGTAAAGACAACCTGACCGCAAATGGCGTTGACTTACCTGATGTTGAAGGTGCGATCGTATCAGGTACTGCCAGT GGTGACTGGACGTTGTCGTGCGTTCGTGGCCAGGTCAATAGTATTACGTTTGTGTTTTCCGATGGTACCGTTCGCACATT GCCGCGTGCCAACGCCAACAGCAATGGCAGTAGTAGCGGCAATGATCAAGGTGCAAGTGGCGCTAATGGTGGTATTGGCT GGATTTCTGATGAAGCGGGGATCCCGTGCATCAGTGGCGAGCGAAAATCTAACGCATCTACCTATCTGCCCACCATTTTT GCCCTCTCTGCTGGATCTGGGGCAGCCAGCGCGTTGAGCCAGAATCAGCAAACGACGCAAGCAAATGGTTACGGTGGGAT GACGTCCTCACTCACGGGAGACGCAGGGCAGGCCGTCCTTGGCAAAGCGCTGGCCGGTGGCCTGAATGAGACGACTGACT GGGTGAAACAGCGCTACGGGCAGACATTTGATGCGATTTATGTCCCGCCTGGCATGCGATTAGCCGTGCATATTACGAAG CAACTGGCGATTGATTACGAAGATAAAGGTCGCAAGGTTCGGTATGACTTCTCGTTGCCGGCTGATGGTGGCAGTCAACG TGGTTTAGATTAA Protein sequence : MQIKSNTLVKVIVPSVLAIGALIGVKSCQSPDQAQSTADTAKTTLGLSQDELKALGVAGDTPEDTLRTVVGSLNQVRSDL GKLSQQNEDLKKQNDVLTRRSTDVSGQVNEAVSGVQQSYDTQQKRLQDEQLRIQNKIQELTDKLANTMSNPGGHISGGSN YLGSSGHGDIPLGLGLDGMGSGTTGTQSQGADGLIWVQPKDQKPTDPNKTSSAGMPALPQFPTSFLNDNELTRQKAAYEQ QVKGYSNEKNEVTAEPVYTLPENSTLIGSRAMTALLGRVPINGTVTDPYPFKVLIGKDNLTANGVDLPDVEGAIVSGTAS GDWTLSCVRGQVNSITFVFSDGTVRTLPRANANSNGSSSGNDQGASGANGGIGWISDEAGIPCISGERKSNASTYLPTIF ALSAGSGAASALSQNQQTTQANGYGGMTSSLTGDAGQAVLGKALAGGLNETTDWVKQRYGQTFDAIYVPPGMRLAVHITK QLAIDYEDKGRKVRYDFSLPADGGSQRGLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2579 | YP_002152298.1 | hypothetical protein | Not tested | Not named | Protein | 1e-120 | 53 |
| STY4570 | NP_458655.1 | putative exported protein | Not tested | SPI-7 | Protein | 2e-110 | 53 |
| t4268 | NP_807865.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-111 | 53 |
| YpsIP31758_3707 | YP_001402661.1 | hypothetical protein | Not tested | YAPI | Protein | 3e-109 | 51 |
| api37 | CAF28511.1 | putative exported protein | Not tested | YAPI | Protein | 1e-109 | 51 |
| YE3484 | YP_001007643.1 | hypothetical protein | Not tested | YAPI | Protein | 8e-101 | 49 |
