Gene Information

Name : ECA0556 (ECA0556)
Accession : YP_048672.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 624021 - 624608 bp
Length : 588 bp
Strand : +
Note : Similar to Salmonella typhi hypothetical protein sty4559 sty4559 or t4257 SWALL:Q8Z1K5 (EMBL:AL627282) (183 aa) fasta scores: E(): 3.2e-31, 50.28% id in 173 aa, and to Pseudomonas aeruginosa conserved hypothetical protein SWALL:Q8GQ43 (EMBL:AF440523) (196

DNA sequence :
ATGCTGATTATATTCAGTATTTTCTCTGCCAGTGTTAGTGCGTCACGACAGTCAGTGCCTGACGGGTATCAGCGTGTTGC
GTATTTACATCAGGTTCCGCCTGAGCTGTTCTATGCACAATCATTACAGGAGTCTAGCCGCAAGCTGCCTCATGGCGTTC
GTCCCTGGCCCTGGAGCATTAATGTCCAGGGGAGGAGCTATCAATATGACAGCCGACTGGAAGCCTGGCAGGCACTACAA
CGTTTTTTGAAGACGGTTCCACATAAAAATATTGATGTCGGATTAGGGCAGGTTAACTGGGGTTGGAACGGTCGTCGTTT
TGCAAACTCCTGGGAGGCGTTTGAACCCTATACCAATCTGAATGTTTCGGCTCAAATCCTACGTGAATGCTACGAGAGAA
AGCCGGACAGTTGGTTGCGTGCGGTTGGTTGTTACCACCATCCGGCCGGTGGTGCCCCAGCGGCAAGATACATTTCTGCG
GTACAGCACAAGCTAGCCATGATTGAATCTTCGACAGCAGCTTCCCCCCTTCCTGAGATTGCTCATGCTACTCAACTTGT
CTGGATCGAACCCCGGAGCGTCAAATAA

Protein sequence :
MLIIFSIFSASVSASRQSVPDGYQRVAYLHQVPPELFYAQSLQESSRKLPHGVRPWPWSINVQGRSYQYDSRLEAWQALQ
RFLKTVPHKNIDVGLGQVNWGWNGRRFANSWEAFEPYTNLNVSAQILRECYERKPDSWLRAVGCYHHPAGGAPAARYISA
VQHKLAMIESSTAASPLPEIAHATQLVWIEPRSVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2591 YP_002152310.1 lytic transglycosylase Not tested Not named Protein 3e-44 53
YE3494A YP_001007653.1 hypothetical protein Not tested YAPI Protein 9e-42 48
STY4559 NP_458645.1 hypothetical protein Not tested SPI-7 Protein 3e-38 48
t4257 NP_807855.1 hypothetical protein Not tested SPI-7 Protein 3e-38 48
YpsIP31758_3720 YP_001402674.1 transglycosylase Not tested YAPI Protein 6e-42 48
api25 CAF28499.1 conserved hypothetical protein Not tested YAPI Protein 4e-42 48
pph70 CAI36111.1 soluble lytic murein transglycosylase Not tested PPHGI-1 Protein 4e-24 44
ORF SG70 AAN62292.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 3e-24 44
unnamed ABR13378.1 hypothetical protein Not tested PAGI-5 Protein 3e-22 42
RL050 AAP84175.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-22 42
ORF C67 AAN62161.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 1e-25 41
EXA50 ABD94659.1 conserved hypothetical protein Not tested ExoU island A Protein 6e-23 41