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Name : rci (ECA0546) Accession : YP_048662.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : shufflon-specific DNA recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4973 EC number : - Position : 616235 - 617362 bp Length : 1128 bp Strand : + Note : Similar to Escherichia coli shufflon-specific DNA recombinase Rci SWALL:RCI1_ECOLI (SWALL:P10487) (384 aa) fasta scores: E(): 4.8e-91, 64.36% id in 376 aa DNA sequence : ATGAAAAAACGTATAAAAAAGATACTGCTAAGTAAGGCGCTGGATAAGTATTTTTCTGCCGTGTCGCGGCATAAAAGAGG TCAGTTACAGGAGTTTTATCGAATAAATGTTATCAAAAGGTCATCGCTTGCTGACAGGTACATGGATGAGGTCTCATCAG TCGATATTGCTAGCTACAGGGATGATAGGCTGGCCCAGATTAATCCTCGAACAAAAAAAGCTATCAGCGGCAATACCGTT CGTCTTGAAATGGCGTTGCTCTCGGCATTGTATAATTTGGCTAAAGTTGAATGGGGAACATGTACAACTAATCCCGTTGA GAATGTAAGAAAACCAACGGTTTCTTCGGGGAGGACGCGCAGGTTAGCTTCTCAGGAAGAACGGAAAATAATGCGTTATT TTAAAGGTAAAAACCCTGAATTATTGGCAATATTTCGTTTGGCTGTTGAGACTGCAATGAGGCAGGGCGAGATATTGTCA TTACGTTGGGAGCATATAGACCTTCGACTCGGTATTGCTCACCTGCCATTAACGAAAAACGGCTCTGCACGTGATGTACC ATTGTCTTCGAAAGCACGCGAGGTACTGAAAGATATTAGTGAGCTTGTTCGGCACGAATGCGGGAGTGTTTTTTCCTATA CTTCAAGCGGTTTTAAAAGCGCGTGGCGTATTGCATTGCAGTCCATGTCTATTGAAAATCTCCATTTTCACGATCTTAGG CATGAAGCTATCAGTCGCTTGTTCGAGTTGGACACGTTGAACGTTATGGAAATCGCAGCAATATCAGGGCATAAATCCAT GAATATGCTAAAACGGTATACTCATCTCAGGGCGACTCATCTTGTCGGTAAACTCGATGCACGTAAGAAACAGGCACAGA AACTAATTTCGATTTTCATACCGTACCCAGCGGATATCGAAGTTCATGATAGTGGGAGGGTAACAATGACATTTTCTGAT TTTGATGATTTGGCGGTTACCGCCCCAACATATGATGATGCGTTAAGAGTAGCATCTGTTGAATTACTCAGATTTCAAGC GATAGCTGCAAAGAATGGCGAAAGGCTCCCTCCTCCTGGTCATATATCTGTCAATATGAGTGAACGCATACTGATCAACC CACTCTAA Protein sequence : MKKRIKKILLSKALDKYFSAVSRHKRGQLQEFYRINVIKRSSLADRYMDEVSSVDIASYRDDRLAQINPRTKKAISGNTV RLEMALLSALYNLAKVEWGTCTTNPVENVRKPTVSSGRTRRLASQEERKIMRYFKGKNPELLAIFRLAVETAMRQGEILS LRWEHIDLRLGIAHLPLTKNGSARDVPLSSKAREVLKDISELVRHECGSVFSYTSSGFKSAWRIALQSMSIENLHFHDLR HEAISRLFELDTLNVMEIAAISGHKSMNMLKRYTHLRATHLVGKLDARKKQAQKLISIFIPYPADIEVHDSGRVTMTFSD FDDLAVTAPTYDDALRVASVELLRFQAIAAKNGERLPPPGHISVNMSERILINPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rci | NP_807850.1 | shufflon-specific DNA recombinase | Not tested | SPI-7 | Protein | 3e-119 | 65 |
| rci | AAC38070.2 | Rci | Not tested | SPI-7 | Protein | 2e-119 | 65 |
| rci | NP_458640.1 | shufflon-specific DNA recombinase | Not tested | SPI-7 | Protein | 3e-119 | 65 |
