Gene Information

Name : ECA0524 (ECA0524)
Accession : YP_048643.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 598803 - 599600 bp
Length : 798 bp
Strand : +
Note : Similar to Pseudomonas aeruginosa conserved hypothetical protein SWALL:AAN62197 (EMBL:AF440523) (263 aa) fasta scores: E(): 4e-15, 31.71% id in 227 aa, and to Salmonella typhi hypothetical protein Sty4529 sty4529 SWALL:Q8Z1L6 (EMBL:AL627282) (259 aa) fast

DNA sequence :
ATGTCAGAGTTAGATCATGGTGTGAATAATGACACACATCAGGAACCCGCTTCATCAGAGCCAGTCACTTCATCTTCTGC
CACTCAACCTGTCCGTGAGAGAGAATCCCGTTCCGGCGCATTGAAATCATCTTTGACCCTTGAACTCCATACCCATTACG
CGATTCGATTATGGGATGGTCGCAGAAAGGAAGATGCAGGCGAGGATTTGGCAAAAAAACAAAAAGAGCGCCCCCGATTT
TTTACGATCTTTAGTATGCCTCAGGTTATTGCTGTTGCTGGCGTGGCAAACAATGATTCGTCAGCTGACAACCCGTATGC
GGATGCATTGTTAGTTAAGTTGGAAAATGCTCTGGGTGTATCGAGCCAAAAAATACAGTCTGATGTTGACGAACTATCCG
GGATTTTAAAAGCGATCCCTCAAACGCTTTCATTAACCGATGTGCGCTCTGTTTCTCCGTTAAATATTGGCGTGTATAGC
CGTTCGCCTCTTGGCTACCGTTGTGTATGGTTATTGGTTGGATATGACCAGCTTGCAATGAGGGTGTTTCAGGCCTTTCA
CTACGGATTAATTTCCAGGGCGCAGAGGGATAAATACCTCGACAATAATGGTTATGCAGTAAGACGAATTTATCATTTGG
TGCAGGGTTATAGATCATTCAATGTTACTCGAAGCGACATTTTATCTAAAACACCCGTTGGTATTAAAGCGATAGAGCGT
TTCGGCGAACCAGATCCCGATATTATGTCTGGCCACGTTCGCTCATCATTCTCATCACCGTTGCGTGGGGGAGAATGA

Protein sequence :
MSELDHGVNNDTHQEPASSEPVTSSSATQPVRERESRSGALKSSLTLELHTHYAIRLWDGRRKEDAGEDLAKKQKERPRF
FTIFSMPQVIAVAGVANNDSSADNPYADALLVKLENALGVSSQKIQSDVDELSGILKAIPQTLSLTDVRSVSPLNIGVYS
RSPLGYRCVWLLVGYDQLAMRVFQAFHYGLISRAQRDKYLDNNGYAVRRIYHLVQGYRSFNVTRSDILSKTPVGIKAIER
FGEPDPDIMSGHVRSSFSSPLRGGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4529 NP_458623.1 hypothetical protein Not tested SPI-7 Protein 6e-41 47
t4233 NP_807835.1 hypothetical protein Not tested SPI-7 Protein 2e-40 46
PMI2632 YP_002152334.1 hypothetical protein Not tested Not named Protein 2e-39 42
api6 CAF28480.1 hypothetical protein Not tested YAPI Protein 1e-36 42
YpsIP31758_3742 YP_001402696.1 hypothetical protein Not tested YAPI Protein 5e-37 42
YE3510 YP_001007672.1 hypothetical protein Not tested YAPI Protein 9e-37 42