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Name : ECA0519 (ECA0519) Accession : YP_048637.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 592768 - 594162 bp Length : 1395 bp Strand : + Note : Similar to Escherichia coli, and Shigella flexneri replicative DNA helicase DnaB or GroP or GrpA or b4052 or sf4154 SWALL:DNAB_ECOLI (SWALL:P03005) (471 aa) fasta scores: E(): 1.8e-87, 54.5% id in 455 aa DNA sequence : TTGGCTGTGGCGGAAAGGAGGCTGCGCATGGCTAACTCTCAGATGCAATTTCTTCCTTCTTCTTTGGAGGCAGAGCAATC AGTCATCGGGGCATTAATGCTTGAGAACAACCGCTGGGACGATGTGGTTGAACGGATTGTTGTTGGCGATTTTTATAACA GGGCACATCAGCAGATATTTAAGGCTATGCAACGGTTGGTCGAGAGCGGTCAACCTATCGACCTCATAACGCTGTCTGAA TCAATCGAAAAAGCCCCTGATAACCTGTTTGAGTCAATTGGCGGATTTGCTTACCTCGCCGAGTTGGCTAAAAACACGCC GAGTGCAGCGAATACGAATGCCTATGCTGAAATTGTCAGAGACAGGAGCCAGGCTCGTCAGTTGGTGGCATTGGGTAAGA AAATCAGCGCTGATGCTATGTCCACTGCACATGGCCGAATAAAAATTTCAGATATCGCGGAACAGGCTGAACAGGCACTT TTTGACGTATCGGAACAGCGCGAAGCCAAAAGCGAAATACCACTCCAACAGGGGTTGACGTTGGTTGTCAATCGGCTAGA ACGCAACTATGCCGTACCCGATGGAATAACGGGAACGCCTACGGGATATATCGAGCTGGATAAAGAAACGTGCGGTCTTC AGGAAGCGGATCTGATTATTCTTGCTGCGCGTCCTTCCATGGGTAAAACATCGTTAGGGCTAAATTTCGCTGAAAATGCG TTTGGGCGTGTATCTGATAAACCCGTATTCATATTTAGTCTGGAGATGCCAGCAGACCAGTTACTCATGCGTATGGCTGC ATCTATTGCACATGTGAGTGTACAGGCCATGCGCAGCGGCCAATTGAATGATGAAGATTGGGCGCGAATATCAGATGCAT TGGGTGTCATGAAATCCTGGGGCGATCGTCTGGTAATTGATGATAACAGTGATTTAACCCCATCTTTGTTACGTTCTCGT CTACGCCGTTTTATTCGTAAATACGGTCAACCTTGCTTAGTCATGGTTGATTACTTACAGCTAATGAGCTCTCCAGGTTC TGAAAACCGCACTCAGGAAATATCGGTAATCTCTCGTTCTCTAAAGGCCATTGCCAAGCATTTTAATGTTCCTTTACTTG CATTATCTCAGCTAAATCGTGCGTCACAAACTCGGGCCGATAAGCGACCAACACTCTCTGATCTTAGAGATGGTGGTTCT CTGGAACAGGATGCGGACATGATCATGTTTATCCACCGTGAAGAAGTTTATGACTCGAATACTCCGGATAAAGGGTTGGC AGAAATCATCATTGGTAAACAACGTCAGGGGCCCGTGGGTACAGTAAAACTTGCCTTTGATGCGCAATATACGCGTTTTA GAGAATGGAATTTAGGCTATGGAGAGAAATACTAA Protein sequence : MAVAERRLRMANSQMQFLPSSLEAEQSVIGALMLENNRWDDVVERIVVGDFYNRAHQQIFKAMQRLVESGQPIDLITLSE SIEKAPDNLFESIGGFAYLAELAKNTPSAANTNAYAEIVRDRSQARQLVALGKKISADAMSTAHGRIKISDIAEQAEQAL FDVSEQREAKSEIPLQQGLTLVVNRLERNYAVPDGITGTPTGYIELDKETCGLQEADLIILAARPSMGKTSLGLNFAENA FGRVSDKPVFIFSLEMPADQLLMRMAASIAHVSVQAMRSGQLNDEDWARISDALGVMKSWGDRLVIDDNSDLTPSLLRSR LRRFIRKYGQPCLVMVDYLQLMSSPGSENRTQEISVISRSLKAIAKHFNVPLLALSQLNRASQTRADKRPTLSDLRDGGS LEQDADMIMFIHREEVYDSNTPDKGLAEIIIGKQRQGPVGTVKLAFDAQYTRFREWNLGYGEKY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-110 | 57 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 8e-111 | 54 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 4e-110 | 54 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 2e-111 | 54 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-104 | 53 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-104 | 53 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 3e-96 | 48 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-90 | 46 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 1e-78 | 44 |
