Gene Information

Name : ECA0516 (ECA0516)
Accession : YP_048634.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG1192
EC number : -
Position : 590844 - 591731 bp
Length : 888 bp
Strand : +
Note : Similar to Salmonella typhi hypothetical protein Sty4521 SWALL:Q8Z1M3 (EMBL:AL627282) (344 aa) fasta scores: E(): 1.8e-79, 73.03% id in 293 aa

DNA sequence :
ATGAAAATTTTACCCGTAATTTCGACAAAGGGCGGCGAAGGTAAGTCTACTCAAGCTGCTAATCTTGCTGGTTTTTTTGC
TGATGCAGGGTTAAAGACTTTGCTTATCGATGGCGACTATTCGCAACCTACAGCCAGCAGTATTTATGCGCTGGAGCATG
AGGCTCCGTTTGGATTGTTTGAACTGTTAATGCAGACAACAGATTTAAACCAGCCAGAGAGCATAATTTCTCGAACAGCC
ATACCCAATCTTGATCTCATCATTTCCAACGATCCTGATGATCGCCTTCCCACAGCAATGCTTCATGCCCCTGATGGACG
CATGCGTCTCAAGAACATCCTTCAGCATCAAAGTTTCCAGAGTTACGACGTCATCATGATTGACTCGAAAGGGGCTGCCG
GTGTGATGGTTGAACTCGTTGTTCTGGCTGCAACAGAAAATGTTGTTGGCGTGATTAAACCCATACTTCCTGATGTTCGG
GAATTCATGCGCGGAACGGTGCGTCTAATGTCCCGCTTACTTGCGTTGCAGGCATACGGAATTCAGATCCCTGATATCAA
AATTTTGGCCAACTGTGTTGAGAACACATCATTGGATCGTAAGACCTTGGAAGAGTTGGGCAATATCGTTTCTGAGAAGA
AATACCTTCAATCCGAAAGCATCAATATTTCCATACTTGAAACAAAAATTGACCAGCTCGAAGTCTATAAGCGTGGTCAT
GCCTTTGGTCAACCAGTCCACCGTCTTGAGTATGTAACCGATCGCAAAAGCGCTGCGGCTGCAGTAACCATGCATAGTCT
CGCTTGCGAGCTATTCCCGCATTGGAAAGATAAGTTTGATTCCGTGTTACGGAATCAAACTGGTGCAGGGGAGGTAGCCA
GTGTTTAA

Protein sequence :
MKILPVISTKGGEGKSTQAANLAGFFADAGLKTLLIDGDYSQPTASSIYALEHEAPFGLFELLMQTTDLNQPESIISRTA
IPNLDLIISNDPDDRLPTAMLHAPDGRMRLKNILQHQSFQSYDVIMIDSKGAAGVMVELVVLAATENVVGVIKPILPDVR
EFMRGTVRLMSRLLALQAYGIQIPDIKILANCVENTSLDRKTLEELGNIVSEKKYLQSESINISILETKIDQLEVYKRGH
AFGQPVHRLEYVTDRKSAAAAVTMHSLACELFPHWKDKFDSVLRNQTGAGEVASV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4521 NP_458616.1 hypothetical protein Not tested SPI-7 Protein 4e-105 73
t4226 NP_807828.1 hypothetical protein Not tested SPI-7 Protein 4e-105 73
PMI2642 YP_002152344.1 chromosome partitioning-like protein Not tested Not named Protein 7e-94 68
YE3515 YP_001007677.1 hypothetical protein Not tested YAPI Protein 1e-87 62
YpsIP31758_3748 YP_001402702.1 hypothetical protein Not tested YAPI Protein 3e-86 61
api1 CAF28475.1 putative ATPase Not tested YAPI Protein 2e-86 61
unnamed ABR13462.1 Soj Not tested PAGI-5 Protein 2e-43 44
soj AAP84239.1 chromosome partitioning protein Not tested PAPI-1 Protein 2e-42 42
soj AAN62324.1 putative chromosome partitioning related protein Not tested PAGI-3(SG) Protein 9e-36 41
soj AAN62201.1 putative chromosome partitioning related protein Not tested PAGI-2(C) Protein 2e-37 41