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Name : ECA4276 (ECA4276) Accession : YP_052363.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : Rhs-family protein Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 4790693 - 4792522 bp Length : 1830 bp Strand : + Note : Similar to Photorhabdus luminescens VgrG SWALL:AAN64196 (EMBL:AY144117) (631 aa) fasta scores: E(): 3.4e-130, 53.79% id in 606 aa, and to Yersinia pestis rhs accessory genetic element ypo3606 or y0268 SWALL:AAM83862 (EMBL:AJ414158) (800 aa) fasta scores: DNA sequence : GTGGCAAACAGTACAGGATTACAGTTCACGGTAAAGGTCGGTGCATTGCCCGCCCCGACGTTTGCGGTGGTGGATTTTCA GCTCAGCGAGGCGCTTAACCGGCCATTTGCCTTGTCGCTGAATCTGGCAAGTGCCTTGCCGGATGTGGATTTCGGTGCGG TGCTCGACCAACCGTGTGAGTTGCTGGTGTGGTACGAAGGCGAACTAAAGCGCCGAGTGAGCGGGATTATCAGCGCCTTT GCGCAGGGGGACACGGGCTTTCGTCGCACGCGCTATCAGATGGAAGTCCGTCCGGCCTTGTGGCGACTGGGATTACGTAC CAACGCCCGCATCTTTCAGGCGCAAAAGCCGGAAGCGATTATCGGCACACTGCTGGAAGAAGCAGGGATTACCGACTACG CCTTTGCGCTGCGTCATGAGCACGCGCCCCGGGAATACTGCGTGCAATATCGGGAAAGCGATTTGGCGTTTGTCACCCGA CTGGCCGCAGAGGAAGGGTTGTACTTCTTTCACGAGTTTGAAGAAGGCAAACACCGAGTCATCTTTGCCGATGATGCAGG CGCATTGGCAAAAGGCCCAGAGCTGTTCTTCAACCTCGCCAACCAGGGGCTAAGCGAAGGCGACTATGTGCGTCGTTTCC GCTACGCCGAAACAGTCAGCACCGCAGAAGTGGCACTCAAAGACTATAGCTTCAAAACCCCCGCCTACAGCCTGCTGCAC AGCAAGATAAGTGGCAAACTGGACCATCAGCGCGAAAGCTACCAGCACTATGACTACCCAGGGCGCTTCAAACAGGACCC GAGCGGCAAGGCGTTTACCGGCTACCGACTGGACGCGTTACGCGCGAATGCCATGGCGGGTTCAGGCGAATCCAATGCCG CGATGCTGATGCCAGGCAACAGCTTTACCCTCACCGAACACCCCAACCCCGTGCTCAATACCGGCTGGCAGTTGGTGGCC ATTATCCACAGCGGGCAACAGCCACAAGCGCTGGAAGAAGAAAGCGGCGGCGAACCGACCACCTACAGCAACAGCTTTGA GGTTATCAGTGCCAAAAGCACCTGGCGTGCGGATTTGCCGTACAAACCGATGGTAGACGGCCCGCAGATCGCGACGGTCG TCGGCCCCGCAGGGGAAGAAATCTACTGCGACGAATACGGCAGAATCAAACTGCAATTCCCGTGGGACCGCTACGGCTCC AGTGATGACCAGAGTTCGTGCTGGGTGCGGGTGAGTCAGGGTTGGGCAGGCGGCCAGTACGGCTTGATTGCCATTCCACG CATCGGCCATGAAGTGATTGTCAGCTTCCTCGAAGGCGACCCAGACCAGCCAATTGTCACTGGCAGGACGTTCCATGCCA CCAATCCGTCGCCGTACCCGCTGCCCGCCAATAAGACACGCACCTCGCTGCGTACCTCAACGCACAAAGGGGCCGGGTTC AACGAATTGCGCTTTGAAGATCAGGCCGGTCAGGAGGAGGTGTTTATTCATGCCCAGAAGGACATGAACACCGTTGTGTT GAATAACCGCACAACCAGTGTGGCAGCTGACCATACCGAAAGCGTCGGCGGAAATCAGGCAATGTCGGTGGTGAAAGACC AATCTACCGAGATTCAAGGGCATCAGAATATCGCCGTCACCAAAAACCGCAGCACCACCGTGGATGACAACGACTCCCTG CAGGTGAAAAACAACATCGCCATTCAATCACAGGAGGGCGACATCCTAATTGCCACCAAAGGCGGTTTTATTGGTATCAG CGCCGATGGCGTCATCAACATCAAGGGCAGCCACATTGTGGTAAATGGCCAGCAAATCGACCTGAACTGA Protein sequence : MANSTGLQFTVKVGALPAPTFAVVDFQLSEALNRPFALSLNLASALPDVDFGAVLDQPCELLVWYEGELKRRVSGIISAF AQGDTGFRRTRYQMEVRPALWRLGLRTNARIFQAQKPEAIIGTLLEEAGITDYAFALRHEHAPREYCVQYRESDLAFVTR LAAEEGLYFFHEFEEGKHRVIFADDAGALAKGPELFFNLANQGLSEGDYVRRFRYAETVSTAEVALKDYSFKTPAYSLLH SKISGKLDHQRESYQHYDYPGRFKQDPSGKAFTGYRLDALRANAMAGSGESNAAMLMPGNSFTLTEHPNPVLNTGWQLVA IIHSGQQPQALEEESGGEPTTYSNSFEVISAKSTWRADLPYKPMVDGPQIATVVGPAGEEIYCDEYGRIKLQFPWDRYGS SDDQSSCWVRVSQGWAGGQYGLIAIPRIGHEVIVSFLEGDPDQPIVTGRTFHATNPSPYPLPANKTRTSLRTSTHKGAGF NELRFEDQAGQEEVFIHAQKDMNTVVLNNRTTSVAADHTESVGGNQAMSVVKDQSTEIQGHQNIAVTKNRSTTVDDNDSL QVKNNIAIQSQEGDILIATKGGFIGISADGVINIKGSHIVVNGQQIDLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 2e-163 | 54 |
| aec15 | YP_851429.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 5e-131 | 44 |
| aec15 | AAQ96709.1 | Aec15 | Not tested | AGI-1 | Protein | 3e-131 | 44 |
