|
Name : ECA4047 (ECA4047) Accession : YP_052134.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : alanine racemase Function : - COG functional category : R : General function prediction only COG ID : COG0325 EC number : - Position : 4514044 - 4514856 bp Length : 813 bp Strand : - Note : Similar to Xylella fastidiosa hypothetical protein Xf1717 SWALL:Q9PCR1 (EMBL:AE003995) (266 aa) fasta scores: E(): 5.6e-63, 71% id in 238 aa, and to Pseudomonas aeruginosa hypothetical upf0001 protein Pa0394 SWALL:Y394_PSEAE (SWALL:P24562) (230 aa) fasta DNA sequence : ATGCCGATATCTTCCGATACACCCACCCGCCACGACAGCCACGGTCGCTATCCCGACGCTGCCACGGTTGAGGATTTTCA ATTTAATCTGGCAGCGGTGCAGATGCGCATCGCGGCGGCCTGTCACCGCGTCGGCCGCGATCCTGCAACAGTGCGCTTGC TGCCAGTCAGCAAGACCAAGCCAGAAAGTCGCCTGCGTATGGCCTATACAGCAGGTTGCCGGATATTGGGTGAGAACAAG GTGCAGGAGGCGTACGGCAAATGGGAAGCCATGCAGGACTTAGCCGACTTACAGTGGTCGGTCATTGGTCACCTGCAAAC CAACAAGGCTAAGCTGGTGGCTCGCTTCGCTAGCGAATTTCAGGCATTGGATAGCCTGCGACTGGCTGAAGCGTTGGATC GCCGCTTACATGTTGAAGGACGCTCATTGGACGTCTTCGTGCAGGTTAACACCTCCGGCGAGGCGAGTAAGTACGGCCTT TCTCCTGAAGACGTACCCGCTTTTATTCAGGCGCTTCCCGCATTTTCTGCGCTACGTGTGCGTGGACTCATGACGCTGGC ATTGTTCTCCAGCGAGGCCGAACGTGTACGACAGTGTTTTATTCGACTGCGTAACCTACGCGATAGGTTGCAGCAAAACG CGCCTGTCGACATCCGGCTGGATGAATTATCCATGGGGATGTCCGGCGATTTTGAGATCGCGATCGAGGAGGGTGCCACC GTAGTACGCGTCGGTCAGGCGATCTTCGGTGCGCGCCCTTTGCCGGATAGTTACTACTGGCCTGATGAAACCACCACAGA AGTACACCTTTAA Protein sequence : MPISSDTPTRHDSHGRYPDAATVEDFQFNLAAVQMRIAAACHRVGRDPATVRLLPVSKTKPESRLRMAYTAGCRILGENK VQEAYGKWEAMQDLADLQWSVIGHLQTNKAKLVARFASEFQALDSLRLAEALDRRLHVEGRSLDVFVQVNTSGEASKYGL SPEDVPAFIQALPAFSALRVRGLMTLALFSSEAERVRQCFIRLRNLRDRLQQNAPVDIRLDELSMGMSGDFEIAIEEGAT VVRVGQAIFGARPLPDSYYWPDETTTEVHL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CpI19_1562 | YP_005686005.1 | Pyridoxal phosphate enzyme, YggS family | Not tested | PiCp 6 | Protein | 2e-40 | 52 |
| Cp1002_1555 | YP_005681817.1 | Pyridoxal phosphate enzyme, YggS family | Not tested | PiCp 6 | Protein | 2e-40 | 52 |
| CpC231_1557 | YP_005683917.1 | Pyridoxal phosphate enzyme, YggS family | Not tested | PiCp 6 | Protein | 2e-40 | 52 |
| cpfrc_01564 | YP_003783964.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-40 | 52 |
