Gene Information

Name : qacH (ECA3770)
Accession : YP_051859.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Virulence
Product : quaternary ammonium compound resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 4213115 - 4213531 bp
Length : 417 bp
Strand : +
Note : Similar to Escherichia coli quaternary ammonium compound resistance protein QacH SWALL:Q9F0S6 (EMBL:AF205943) (110 aa) fasta scores: E(): 3.8e-13, 41.28% id in 109 aa

DNA sequence : 
ATGTCACTCAGAAAGCAGTCATGGCTGTGGATGTTATTGGTCATCTTGTCAGAAACGTCCGCTACCTCCACGTTAAAAAT
GTTTGATAATAGTCAGGGAATGACAAAGGCAGCATTACTGGCGATTATTATTCTGCTGTACTGCGTTTGTTATTATTCAC
TCTCAAAAGCCGTAAGGCATCTCCCCGTTGGGCTAGCTTATGCCACCTGGTCTGGTACAGGTATTTTATTAGTTTCAACG
CTCAGTATTATTTTTTACGGACAGCACCCTGATATCCCAGCAATCGTTGGAATGATCGTGATTGCTACAGGCATAATGAT
CATGAATCTCTTTTCTAAAATGGGCGTGGATGAACAGCCTGAAAAACTGGATAGCAGTAACCAGAGTCAGCCATTAGAGA
CAAAAATCATTCACTGA

Protein sequence : 
MSLRKQSWLWMLLVILSETSATSTLKMFDNSQGMTKAALLAIIILLYCVCYYSLSKAVRHLPVGLAYATWSGTGILLVST
LSIIFYGQHPDIPAIVGMIVIATGIMIMNLFSKMGVDEQPEKLDSSNQSQPLETKIIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42068.1 hypothetical protein Not tested PAI II 536 Protein 5e-40 69
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 1e-14 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qacH YP_051859.1 quaternary ammonium compound resistance protein NC_010410.6003348.p0 Protein 7e-13 43
qacH YP_051859.1 quaternary ammonium compound resistance protein BAC0002 Protein 7e-13 43
qacH YP_051859.1 quaternary ammonium compound resistance protein BAC0150 Protein 5e-13 42
qacH YP_051859.1 quaternary ammonium compound resistance protein BAC0377 Protein 3e-12 41
qacH YP_051859.1 quaternary ammonium compound resistance protein CP004022.1.gene1549. Protein 5e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qacH YP_051859.1 quaternary ammonium compound resistance protein VFG1587 Protein 2e-40 69
qacH YP_051859.1 quaternary ammonium compound resistance protein VFG1586 Protein 5e-15 41