Gene Information

Name : ECA3444 (ECA3444)
Accession : YP_051534.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 3861956 - 3863434 bp
Length : 1479 bp
Strand : -
Note : Similar to Rhizobium leguminosarum ImpC SWALL:Q93ED1 (EMBL:AF361470) (493 aa) fasta scores: E(): 6.4e-63, 37.36% id in 479 aa, and to Yersinia pestis hypothetical protein ypo3706 ypo3706 or y0038 SWALL:Q8ZAT4 (EMBL:AJ414158) (493 aa) fasta scores: E(): 3.

DNA sequence :
ATGTCAATAGTTGAAGAACAGGCCCAGGCAGGGGCTGCCAGCACCTCTGGCTCGCTGCTTGATGACATCATGGCTCAAGC
GCGTATCAGCCCAGTCGATGAAGGCTATAGCGTGGCTAAACAGGGTATTGCCGCGCTGGTTGCTAACATTCTTGATAGCG
GTAATGCAGCAGAACCCGTGAATAAAGCGCTGGTCGATAGCATGATCGTCGAACTGGACAAAAAGCTCAGCAAGCAGATT
GACGTTATTCTGCATGCGAAAGAACTTCAGGAATTGGAATCTTCCTGGCGTTCTCTGAAACTGCTTATCGATCGCACCGA
TTTCCGTGAAAACATCAAACTGCTGGTGTTGCATGCGACGAAAGAAGAACTGTTGGAAGATTTCGAGTTCGCTCCTGAAA
TCTCACAGTCTGGCTTCTATAAGCACGTTTATTCCAGCGGTTATGGCCAATTTGGTGGCCAGCCTATCGGTGGGGTGATT
GGTGACTATGCGATGACGCAAAGTTCGCCAGACATCAAACTGATGCAGTATGTCAGCGCCGTTGGCGCGATGGCACATGC
GCCGTTCATCTCTTCCGTTGCACCGACCTTCTTTGGCGTGGATCGTTTCACCGATCTGCCTTCCATCAAAGATCTGAAAT
CCGTTTTCGAAGGCCCAGCCTACACGAAATGGCGTTCTCTGCGTGAATCTGAAGACGGCCGCTATCTGGGGCTGACGGCA
CCGCGCTTTTTGGCTCGCCTGCCTTATGACCCGGTTGAAAACCCGATTAAGGGCTTCAACTACAAAGAAGATATCAGCAC
CGATCACGAACACTATCTGTGGGGCAATACCGCCTATCTGATGGGAACGGCGCTGACGGACAGCTTCGCAAAATACCGCT
GGTGTCCGAACATCATTGGCCCACAGAGCGGTGGTGCGATTACCGACTTGCCGGTGCATGTTTATCAAGCCATGGGCCAA
CTTCAGGCCAAGATCCCGACTGAGGTCCTGATCACCGATCGTCGCGAATATGAAATGGCTGAAGAAGGCTTTATCACGCT
GACGATGCGTAAAGACAGTGACAATGCGGCGTTCTTCTCTGCTAACTCGGTGCAGAAGCCGAAGGTGTTCCCGAACACCA
AAGAAGGCAAAGAAGCGGAAACCAACTACAAGCTGGGTACGCAACTGCCTTACATGTTCATCATCAACCGTCTGGCGCAC
TACATTAAAGTGCTTCAGCGTGAACAGATTGGCTCATGGAAAGAGCGTCAGGATCTTGAGCGCGAGCTGAATACCTGGAT
TAAACAGTACATCGCCGATCAGGAGAACCCGCCGGCAGATGTCCGTAGCCGTCGTCCTCTGCGTGCCGCACAAATCAAAG
TGCTGGATGTAGAAGGGGAACCAGGTTGGTATCAGGTCACCATGTCTGTGCGCCCGCACTTCAAGTACATGGGGGCGAAC
TTTGAGCTGTCGCTGGTAGGGCGTTTGGATAAGGAATAA

Protein sequence :
MSIVEEQAQAGAASTSGSLLDDIMAQARISPVDEGYSVAKQGIAALVANILDSGNAAEPVNKALVDSMIVELDKKLSKQI
DVILHAKELQELESSWRSLKLLIDRTDFRENIKLLVLHATKEELLEDFEFAPEISQSGFYKHVYSSGYGQFGGQPIGGVI
GDYAMTQSSPDIKLMQYVSAVGAMAHAPFISSVAPTFFGVDRFTDLPSIKDLKSVFEGPAYTKWRSLRESEDGRYLGLTA
PRFLARLPYDPVENPIKGFNYKEDISTDHEHYLWGNTAYLMGTALTDSFAKYRWCPNIIGPQSGGAITDLPVHVYQAMGQ
LQAKIPTEVLITDRREYEMAEEGFITLTMRKDSDNAAFFSANSVQKPKVFPNTKEGKEAETNYKLGTQLPYMFIINRLAH
YIKVLQREQIGSWKERQDLERELNTWIKQYIADQENPPADVRSRRPLRAAQIKVLDVEGEPGWYQVTMSVRPHFKYMGAN
FELSLVGRLDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-170 70
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 7e-171 70
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 5e-146 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECA3444 YP_051534.1 hypothetical protein VFG2093 Protein 0.0 77
ECA3444 YP_051534.1 hypothetical protein VFG2475 Protein 4e-154 60