Gene Information

Name : ECA3439 (ECA3439)
Accession : YP_051529.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Virulence
Product : lipoprotein
Function : -
COG functional category : S : Function unknown
COG ID : COG3521
EC number : -
Position : 3857044 - 3857565 bp
Length : 522 bp
Strand : -
Note : Similar to Yersinia pestis lipoprotein ypo3596 or y0278 SWALL:Q8ZB33 (EMBL:AJ414157) (181 aa) fasta scores: E(): 4.7e-32, 52.6% id in 173 aa, and to Escherichia coli O157:H7 z0257 protein z0257 or ecs0226 SWALL:Q8X7V0 (EMBL:AE005198) (174 aa) fasta scores

DNA sequence :
ATGCTGCGGGCACTGTGCTTATTTTCCCTGATGTTACTGCTGTCGGGGTGTTCCACGCTGGGCAAGATGGCGCAGGTCGC
GGCGAATCCGGATATCCAGGTGGGCAGCAACAATCATCAGCCTTCTACCGTGGGGTTTAGCCTGCTGGCGGAACCGGATG
TGAATCCGAACGACAGCGGTGAAGCCGCCCCTATCGAATTCCAACTGGTTCTGCTGGCGGAAGATTCGCGTCTGTTAGCA
ACCGATTACGACCAGATCACGACGGATATCGAAAAAGCGTTGGCCAAGAATTACATCAGCCATCAGGACTACACGCTATT
GCCGGGGCAGTTCAAATATCTGCCGCCAGAAGCACTGGATGAAAAGGTGCACTACCTCGGCGTGGTAGCTCGATATGCAG
ATTCGGAAAGCGCGGAGTGGCGCAAAGTCATCAAGCTAAAAAATACCGGACAGACGTATCAGATCCTCGTGCACTTGCGC
CGGGATGAAGTCGAAATCAAAAAAGACCAAGAAGAAGAATAA

Protein sequence :
MLRALCLFSLMLLLSGCSTLGKMAQVAANPDIQVGSNNHQPSTVGFSLLAEPDVNPNDSGEAAPIEFQLVLLAEDSRLLA
TDYDQITTDIEKALAKNYISHQDYTLLPGQFKYLPPEALDEKVHYLGVVARYADSESAEWRKVIKLKNTGQTYQILVHLR
RDEVEIKKDQEEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec24 YP_851421.1 hypothetical protein Not tested PAI II APEC-O1 Protein 7e-34 47
aec24 AAQ96718.1 Aec24 Not tested AGI-1 Protein 5e-34 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECA3439 YP_051529.1 lipoprotein VFG2081 Protein 6e-26 42