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Name : clpB (ECA3345) Accession : YP_051434.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Virulence Product : protein disaggregation chaperone Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3760023 - 3762599 bp Length : 2577 bp Strand : - Note : Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ClpB protein ClpB or HtpM or b2592 or c3114 or z3886 or ecs3455 SWALL:CLPB_ECOLI (SWALL:P03815) (857 aa) fasta scores: E(): 0, 85.64% id in 857 aa DNA sequence : ATGCGTCTGGATCGTCTTACCAACAAATTCCAACTTGCTCTTGCTGATGCCCAGTCTCTTTCCCTTGGGCGTGATCACCA GTTTATTGAACCACTTCATTTGATGAGCGCTTTGCTTCATCAGGCCGGAGGAACTGTTGGTCCACTTCTGACTGTCGCAG GAGCCAATCTTAATCACCTGAAAGCCGAAATCGACCAAGCAATCACGCGTTTGCCTCAGGTTGAAGGTACCGATGGTGAT GTCCAACCTTCGAACGAGTTAGTCCGCGCATTGAATATGTGCGACAAACTCGCGCAAAAGCGTGGTGATACCTTTATTTC CTCAGAACTTTTCGTGCTTGCTGCTTTGGAGTCTCGCGGCACGCTGGGGGATATATTGAAAAAGGCGGGTGTCACGCAGC AAGGTGTAACAAACGCGATTGATCAAGTGAGAGGAGGAGATCAAGTGAACGATCAGGGGGCTGAAGATCAGCGCCAGGCA TTAAAAAAATTCACAATTGACCTCACGGAACGTGCGGAACAAGGCAAGCTCGACCCGGTTATCGGGCGTGATGAAGAGAT TCGCCGTACTATTCAGGTCCTACAACGTCGGACCAAAAATAACCCGGTATTAATTGGTGAGCCCGGCGTGGGGAAAACCG CGATAGTAGAAGGGTTAGCCCAGCGCATCGTTAATGGCGAAGTGCCTGAAGGCCTGAAAAACAAGCGCGTACTTTCGCTG GATATGGGGGCACTGGTGGCTGGTGCCAAATATCGTGGTGAGTTTGAAGAACGTTTGAAAGGTGTACTCAACGATCTGTC TAAACAGGAAGGTAATGTCATTCTGTTTATTGATGAGCTCCATACGATGGTGGGAGCGGGTAAAGCCGATGGCGCGATGG ATGCCGGCAATATGCTAAAACCCGCGCTGGCTCGCGGTGAACTGCATTGCGTTGGGGCGACGACGCTGGATGAATATCGT CAATATATTGAAAAGGACGCCGCGCTTGAGCGTCGTTTCCAGAAAGTGTTTGTCGCGGAACCGACCGTTGAAGACACGAT TGCGATTCTGCGTGGGCTGAAAGAGCGTTATGAATTGCATCATCATGTGCAAATTACTGACCCGGCGATTGTTGCGGCGG CAATGTTGTCCCATCGGTATATTTCGGATCGTAAGCTACCGGATAAAGCCATTGACCTGATTGATGAGGCGGCATCCAGT ATTCGTATTCAGATTGATTCAAAACCAGAGCCTCTCGATCGGCTTGAGCGCCGAATCATCCAGTTAAAGCTGGAGCAACA GGCTCTGAAGAAAGAATCTGATGAAGCCAGTCAAAAGCGGCTTGAGTTACTAAGTACGGAACTTGACCAAAAAGAGCGTG AATATTCCCGACAAGACGAAGAGTGGAAAGCGGAAAAAGCGTCACTCACGGGAACGCAGAATATTAAGGCCTCTTTAGAG CAAGCGAAAATTTCGTTGGAACAGGCTCGACGTCAGGGAGACCTGGGGAGAATGTCTGAGTTGCAATACGGCAAAATCCC CGAGTTAGAGAAGCAGTTGGCAGCTGCAACGCAGCAGGAAGGAAAAACGGTGCATTTGCTGCGTAATCGAGTCACAGATG TTGAAATCGCTGATGTGCTGGCACGCTGGACTGGAATTCCTGTTTCTCGCATGCTGGAGGGCGAGAAAGAAAAATTATTG CGAATGGAGGATGAACTGCATCAGCGAGTGATCGGGCAGAACGAAGCCGTTGAGGCGGTAGCGAATTCTATTCGTCGCAG CCGGGCAGGGTTATCCGATCCTAATCGTCCGATTGGTTCGTTCCTGTTCCTTGGACCAACGGGTGTGGGGAAAACTGAAC TCTGCAAAACGCTGGCAACTTTTCTCTTCGACAGTGACGACGCTATGGTGCGTATTGATATGTCCGAATTTATGGAGAAA CACTCGGTTTCACGTCTGGTCGGTGCGCCTCCTGGATATGTCGGTTACGAAGAAGGGGGATATCTGACTGAAGCGGTACG CCGTCGCCCTTATTCGGTCATTTTGCTAGATGAGATCGAAAAGGCACACCCTGATGTGTTCAATATTCTGCTTCAGGTAT TGGATGATGGTCGCCTTACTGATGGTCAGGGGAGAACGGTCGACTTCCGCAATACAGTGGTCATCATGACGTCAAACTTG GGATCTGACCTTATTCAGGAACGTTTTGGTGAGCGTAGCTATACCGAAATGAGAGATATGGTTCTTGACGTCGTTAGCCA TAGCTTCCGTCCTGAATTTATTAATCGTATCGATGAAGTCGTCGTATTCCATCCCCTGGGAAGGGCGCATATTACGTCGA TCGCACAAATTCAGCTTCAGAGACTGTACAAGCGTCTTGAAGAGCGTGGATATAGTGTCACGATCACGGATGCCGCTTTA GATATGCTCGGAGAGGTCGGATTCGATCCTGTCTATGGTGCTCGTCCGCTTAAAAGGGCGATACAGCAACTGATAGAGAA TCCACTCGCTCAGCAGATATTAGGGGGGGAACTGATACCCGGTAAGCGGATCACATTAGATGTTGAAGGTGAACAGATAG TCGCACGGCAAGAATAA Protein sequence : MRLDRLTNKFQLALADAQSLSLGRDHQFIEPLHLMSALLHQAGGTVGPLLTVAGANLNHLKAEIDQAITRLPQVEGTDGD VQPSNELVRALNMCDKLAQKRGDTFISSELFVLAALESRGTLGDILKKAGVTQQGVTNAIDQVRGGDQVNDQGAEDQRQA LKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSL DMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR QYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYISDRKLPDKAIDLIDEAASS IRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQKRLELLSTELDQKEREYSRQDEEWKAEKASLTGTQNIKASLE QAKISLEQARRQGDLGRMSELQYGKIPELEKQLAAATQQEGKTVHLLRNRVTDVEIADVLARWTGIPVSRMLEGEKEKLL RMEDELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLATFLFDSDDAMVRIDMSEFMEK HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL GSDLIQERFGERSYTEMRDMVLDVVSHSFRPEFINRIDEVVVFHPLGRAHITSIAQIQLQRLYKRLEERGYSVTITDAAL DMLGEVGFDPVYGARPLKRAIQQLIENPLAQQILGGELIPGKRITLDVEGEQIVARQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 6e-159 | 46 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-102 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_051434.1 | protein disaggregation chaperone | VFG2084 | Protein | 2e-104 | 41 |
