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Name : outF (ECA3107) Accession : YP_051197.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 3465462 - 3466688 bp Length : 1227 bp Strand : - Note : Similar to Erwinia carotovora general secretion pathway protein F OutF SWALL:GSPF_ERWCA (SWALL:P31705) (408 aa) fasta scores: E(): 7.6e-150, 96.56% id in 408 aa, and to Erwinia chrysanthemi general secretion pathway protein F OutF SWALL:GSPF_ERWCH (SWALL: DNA sequence : ATGGCACAGTACCAGTATCAGGCGCTGGATGCGCAGGGGAAAAAATGCCGTGGCAGTCAGGAGGCAGACTCTGCCAGACA GGCGCGTCAGTTATTGCGGGAGCGCGGACTGGTGCCGCTGTCGGTTGATGAAAGCCGAGGCGATCAGCAGAAGTCGGGTT CTACAGGATTTTCTCTACGGCGTAAAATTCGTATCAGTACCTCAGATTTGGCGCTATTGACTCGCCAGTTAGCGACGCTG GTAGCGGCATCGTTGCCGTTGGAAGAAGCACTGGATGCGGTTGCAAAACAGAGCGAAAAACCGCATCTGAGTCAGTTGAT GGCGGCGGTGCGCAGCAAGGTCATGGAAGGTCATTCGCTGGCTGATGCCATGAAATGCTTTCCCAGCAGCTTTGAACGGC TGTACTGCGCAATGGTCGCCGCAGGTGAGACATCAGGTCATCTTGATGCCGTGTTGAATCGGCTGGCAGACTACACTGAG CAGCGCCAACAGATGCGTAGCCGCATACAGCAGGCGATGATCTACCCGTGCGTGCTAACCGTGGTCGCGATTGCTGTGGT CAGCATTTTGCTGTCTGTCGTGGTGCCGAAAGTTGTCGAGCAATTTATTCATATGAAGCAGGCGCTGCCGCTCTCTACCC GGGTTTTGATGGGGATGAGTGATGCAGTGCGCACGTTTGGGCCATGGTTCCTGTTGGCATTGCTGGCCGGATTTATGGCG CTCAGGGTGATGCTGCGGCAGGAGAAGCGGCGCGTCAGTTTTCATCGACGCATACTGCATTTACCGCTGATCGGCCGTAT AGCTCGTGGTCTGAATACGGCACGCTACGCGCGAACACTCAGTATTCTCAATGCCAGTGCGGTGCCGTTGTTGCAGGCGA TGCGCATTAGCGGTGATGTGATGAGCAATGACTATGCCCGCTATCGTCTCGCGATGGCAACGGATGCGGTACGAGAGGGC GTTAGCCTACACAAAGCGCTGGAACAGACGGCGCTCTTTCCCCCGATGATGCGCCATATGATCGCCAGCGGTGAACGCAG CGGCGAGCTGGACAGCATGTTGGAACGGGCGGCAGATAATCAGGATCGTGAATTCAGTTCGCACATGACGCTGGCGCTGG GGTTATTTGAACCGCTGCTAGTTGTCAGCATGGCGGCAGTCGTCCTGTTTATCGTATTGGCGATTTTACAACCGATTCTA CAACTGAATACGTTAATGAGTTCATAA Protein sequence : MAQYQYQALDAQGKKCRGSQEADSARQARQLLRERGLVPLSVDESRGDQQKSGSTGFSLRRKIRISTSDLALLTRQLATL VAASLPLEEALDAVAKQSEKPHLSQLMAAVRSKVMEGHSLADAMKCFPSSFERLYCAMVAAGETSGHLDAVLNRLADYTE QRQQMRSRIQQAMIYPCVLTVVAIAVVSILLSVVVPKVVEQFIHMKQALPLSTRVLMGMSDAVRTFGPWFLLALLAGFMA LRVMLRQEKRRVSFHRRILHLPLIGRIARGLNTARYARTLSILNASAVPLLQAMRISGDVMSNDYARYRLAMATDAVREG VSLHKALEQTALFPPMMRHMIASGERSGELDSMLERAADNQDREFSSHMTLALGLFEPLLVVSMAAVVLFIVLAILQPIL QLNTLMSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 1e-87 | 55 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-87 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| outF | YP_051197.1 | general secretion pathway protein F | VFG2049 | Protein | 7e-85 | 54 |
| outF | YP_051197.1 | general secretion pathway protein F | VFG0181 | Protein | 8e-84 | 52 |
| outF | YP_051197.1 | general secretion pathway protein F | VFG1870 | Protein | 1e-68 | 43 |
