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Name : ECA0293 (ECA0293) Accession : YP_048420.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Virulence Product : D-arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 339921 - 340994 bp Length : 1074 bp Strand : - Note : Similar to Yersinia pestis hypothetical protein ypo3577 SWALL:Q8ZB48 (EMBL:AJ414157) (328 aa) fasta scores: E(): 2e-101, 81.59% id in 326 aa, and to Escherichia coli hypothetical protein Yrbh SWALL:YRBH_ECOLI (SWALL:P45395) (328 aa) fasta scores: E(): 2e- DNA sequence : ATGTCACAGTTTGAACAAGATGCTCATCTAAAACAGCAGTCTGACCGTGCACTATCCGATCACGAACTGCAAGCCGATCA CACGCGACAGAAGACTCATGAACTACCAGCACACTTCGATTTCCAGCAGGCGGGCAAGCAGGTACTGAGTATCGAACGCG ATGGCCTTGCGCAATTAGATCAGTACATTGACGACAATTTTACCCTCGCCTGCAAAAATATCTTTCACTGCAAGGGCAAA GTGGTGGTGATGGGGATGGGCAAATCTGGCCATATCGGTTGCAAGATTGCCGCAACCTTCGCCAGCACCGGTACCCCCGC TTTTTTTGTTCATCCGGGCGAAGCCAGCCACGGCGACCTCGGCATGGTAACCCCGCACGATATCGTGATCGCCATTTCTA ATTCTGGCGAATCGCATGAAATCCTCTCGCTAATTCCCGTTCTGAAACGCCAGAAAGTGTTCCTGATCTGCATGACTAGC GCACCAGAAAGTACGATGGGTAAAGCGGCGGATATTCACCTGTGCGTTCACGTCCCACAGGAGGCCTGCCCGCTCGGTCT GGCCCCCACCACCAGCACCACTGCGACGCTGGTCATGGGCGACGCGCTGGCCGTAGCCTTGCTACAGGCACGCGGCTTTA CCGCCGAAGATTTCGCCCTTTCTCACCCCGGTGGCGCACTCGGCCGCAAACTTTTACTGCGCGTCAGCGATATCATGCAT TCGGGCGACGAGATCCCCCATGTCCCACATGATGCCTCGCTGCGTGATGCGCTGGTGGAAATTACGCGCAAAAATCTGGG TATGACGGTAATCTGCGAGGCGGATATGAAAATTCAGGGCATCTTCACTGATGGTGACCTGCGCCGCATCTTCGACATGA ATATAGACTTGAACAGCGCGCGCATTGCTGATGTGATGACCGCAGGCGGCATCCGGGTCGCACCGCAAACGCTGGCGGTG GATGCACTCAACCTAATGCAGTCGCGCCACATCACCTCGGTGCTGGTGGCAGAAAACGATCGTCTGGTCGGTATTGTCCA CATGCACGATATGTTGCGGGCTGGCGTGGTTTAA Protein sequence : MSQFEQDAHLKQQSDRALSDHELQADHTRQKTHELPAHFDFQQAGKQVLSIERDGLAQLDQYIDDNFTLACKNIFHCKGK VVVMGMGKSGHIGCKIAATFASTGTPAFFVHPGEASHGDLGMVTPHDIVIAISNSGESHEILSLIPVLKRQKVFLICMTS APESTMGKAADIHLCVHVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTAEDFALSHPGGALGRKLLLRVSDIMH SGDEIPHVPHDASLRDALVEITRKNLGMTVICEADMKIQGIFTDGDLRRIFDMNIDLNSARIADVMTAGGIRVAPQTLAV DALNLMQSRHITSVLVAENDRLVGIVHMHDMLRAGVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 2e-51 | 44 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-51 | 44 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 5e-51 | 44 |
