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Name : treC (ECA3014) Accession : YP_051104.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.93 Position : 3368339 - 3370030 bp Length : 1692 bp Strand : + Note : Similar to Escherichia coli trehalose-6-phosphate hydrolase TreC or OlgH or b4239 SWALL:TREC_ECOLI (SWALL:P28904) (551 aa) fasta scores: E(): 1.1e-171, 70.05% id in 551 aa DNA sequence : ATGAGTACATCACTCCCCTGGTGGCAAAACGGCGTGATTTATCAAATCTATCCGAAGAGCTTTCAGGACAGTACCGGAAA TGGCATTGGCGACATCGCTGGTGTCACCGCCCGACTCGATTACCTACAACAGTTGGGCATCGATGCTATTTGGCTGACTC CGGTTTACCTTTCTCCTCAGGTTGACAACGGCTATGACGTGGCCGACTACTGCGCTATCGACCCAGCCTACGGCACGATG GCCGATATGGAAACGTTGATCGCCGAAGCACATCGACGTCGTATTCGTATTGTCATGGATATGGTGTTCAACCATACCTC TACTCAGCACCACTGGTTCCAGAACGCTCAGGATCGCCGCAGCCCCTATCGTCATTTTTATATCTGGCGTGATGGTAATG ACGGTGCACCGCCCAATAACTGGCGTTCAAAATTTGGCGGCCCAGCTTGGCTGTGGCACGCGGAAAGCAAACAATACTAT CTGCACCTTTTCGCTACCGAACAGGCCGATCTGAACTGGGAGCACCCGCGCGTACGGGATGAATTAAAACAGGTCTGTGG ATTTTGGGCGGATAAAGGCGTAGACGGGCTGCGGCTGGATGTAATCAATCTAGTCTCCAAGCAGCAGGATTTCCCGTCAG ACACACAGGGCGATGGACGCCGTTTTTATACCGATGGGCCACTTATTCACGATTACTTACAGGAGTTCAGTCAGGATGTA TTTCAGCCCCGCGGGTTGATGACTGTCGGTGAGATGTCATCGACCTCACTGGAACATTGCCGCCGCTACGCCGCACTGGA CGGCAGCGAACTCTCCATGACGTTCAATTTTCATCATCTGAAAGTTGATTACCCTAATGGGGAAAAATGGACGCTGGCGG AACCTGATTTTATCCAACTCAAGCTGATTTTTAACCACTGGCAGCAGGGTATGCATAACCACGCCTGGAATGCGCTGTTC TGGTGTAATCACGATCAGCCACGCATCGTGTCGCGTTTTGGCGATGAAGGGGAATTCCGTGTGCAATCCGCCAAAATGCT GGCGATGGTGCTACACGGTATGCAGGGCACGCCCTATATCTATCAGGGCGAAGAGCTGGGCATGACCAATCCCGGCTATA CACAGATTGAACAATACCGCGATATTGAAAGCCTGAATCAATTTGCCGAACAGCGCGATCGGGGTCAGGTAGATGAGCAA ATCTTAGCGATCCTCGCCAGCAAATCACGCGATAACGGCCGTACGCCAATGCAGTGGGATGAGAGCGATCATGCTGGATT TACGACCGGCACACCGTGGATAACCCCCAGCCAGAACTTTCCTCACATCAACGCAGAGCAGTCGCTGGCGGATAAAGAGT CCGTCTTTTATACCTACCAGCAGCTTATTGCTATGCGTAAAGCCCTTCCGCTGCTAACGCACGGCGACTATAAGGATCTG CTGCCAGACCACCCTAACGTCTGGTGCTATCAGCGCACTTGGGAGGGGCAACGGCTTCTGGTTCTGGCAAACCTCAGCAA ACAGCCCCTGCGCTGGCAACCTCCGATGGAGACCCACGACCGCCGCTGGCGACTGTTATTTAGCAATTATTCTGATGCAC AGCCGCAACCGGCAATACTGGAGTTGCGACCATTTGAAGCCATCTATTGGATACAGGGAATGCAGGAGAAAGAGGATAAG ATCCAAGAATAG Protein sequence : MSTSLPWWQNGVIYQIYPKSFQDSTGNGIGDIAGVTARLDYLQQLGIDAIWLTPVYLSPQVDNGYDVADYCAIDPAYGTM ADMETLIAEAHRRRIRIVMDMVFNHTSTQHHWFQNAQDRRSPYRHFYIWRDGNDGAPPNNWRSKFGGPAWLWHAESKQYY LHLFATEQADLNWEHPRVRDELKQVCGFWADKGVDGLRLDVINLVSKQQDFPSDTQGDGRRFYTDGPLIHDYLQEFSQDV FQPRGLMTVGEMSSTSLEHCRRYAALDGSELSMTFNFHHLKVDYPNGEKWTLAEPDFIQLKLIFNHWQQGMHNHAWNALF WCNHDQPRIVSRFGDEGEFRVQSAKMLAMVLHGMQGTPYIYQGEELGMTNPGYTQIEQYRDIESLNQFAEQRDRGQVDEQ ILAILASKSRDNGRTPMQWDESDHAGFTTGTPWITPSQNFPHINAEQSLADKESVFYTYQQLIAMRKALPLLTHGDYKDL LPDHPNVWCYQRTWEGQRLLVLANLSKQPLRWQPPMETHDRRWRLLFSNYSDAQPQPAILELRPFEAIYWIQGMQEKEDK IQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-124 | 43 |
