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Name : ECA0280 (ECA0280) Accession : YP_048407.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 329415 - 330869 bp Length : 1455 bp Strand : + Note : Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or b2661 SWALL:GABD_ECOLI (SWALL:P25526) (482 aa) fasta scores: E(): 8.3e-102, 55.41% id in 480 aa, and to Photorhabdus luminescens Orf17 SWALL:AAO17183 (EMBL:AF346500) (490 aa) DNA sequence : ATGTCAGGAAACCATTTACAGGATCATGAACTGTTTAAAACGGGCTACTTCGTTGCGGGGAAGTGGCAGCAGGGCGCAGC CACTTTCGAGGTGGTGAATCCGGCGACGGGTGAGTCTATTGCCCGTGTAGCGAAAGCGGGAAAGAAAGAGACGCAGGCGG CGATTGACGCTGCCCATGCCGCATTCCCCGCCTGGAAGCGTAAAACCGCGAAGGAACGTTCTGAAATTCTGTATCGCTGG TACGAGCTGATTCTGGAGAATAAACGCTATCTGGCGGAGTTGATGACCGCCGAGCAGGGCAAACCGGTGCAGGAAGCCGA AGGCGAAGTCGTTTATGCGGCGAATTTCATTCAGTGGTTTGCTGAGCAGGGAAAACGCGTCAACGGCGAAATTATTCCCC CCGCCAAGCCCGGTTCGAAGATTTATGCCACGCGTGAACCCGTTGGCGTCGTTGTTGCGATTACGCCGTGGAATTTCCCG CTGGCGATGTTGACGCGTAAGTTAGGACCGGCGCTGGCGGCGGGGTGTACCGGCGTGATAAAACCCGCGAACAACACGCC GCTGTCTGCATTTGCACTGTTGGCGCTGGCACAACAGGCGGGCGTACCGGATGGTGTACTCAACGGTGTCGCGGGCGATA CGCAGGCGATTAGCGATACCGTCATGGCGAGCGATAAAGTACGCAAAATCTCCTTTACTGGCTCAACGGCAGTAGGGAAA ACGCTGGTGCGCAACGCCGCCGACACCATGAAGAAAGTGTCGATGGAACTGGGTGGTAACGCGCCTTATATCGTGTTTGA TGATGCGGATATTCAGGCCGCGGTGAAAGGCGCGATCGCTAACCGCTTTCGTAATGCAGGTCAGGTTTGCGTCAGCGCCA ATCGGTTTTATATTCAGGACGGCGTCTATGATGAGTTTGTTTCCCTGCTTGCGGAAGAAGTGAAAAAGCTGAAGGTCGGC AACGGTATGGATGACGGTGTCGTGCTCGGCCCACTGATTGACGAGGCTGCTGTCGAGAAGGTGGAAAAACACGTCAATGA TGCGGTGGAGAAAGGCGGCAAGGCGCTTGTTGGCGGTAAACGACACAAGCTGGGCCACAGCTTTTTTGAACCGACAGTGA TTGTTGACGCTAACGAAGCGATGCTGCTTGCGCAGGAAGAAACCTTTGGCCCGGTTGCCCCGTGTTTTCGTTTCAAAACG GAAGAAGAGGTGATTCAACGCGCCAACAATACGCCGTTTGGTCTGGCGGCTTATTTCTACAGCCAGAATTTGCAGCGTGT GTTCCGCGTGGCAGAAGCGTTGGAGAGCGGCATGATTGGCATTAACGAATGTGCCGTTTCGACTGAGCTTGCGCCATTTG GCGGCGTGAAAGAATCGGGGCTAGGCCGCGAAGGCTCTGTACTGGGGCTAGACGAGTTTCTGGAAGTGAAAACCTGGCAC GTGGGCGGGTTGTGA Protein sequence : MSGNHLQDHELFKTGYFVAGKWQQGAATFEVVNPATGESIARVAKAGKKETQAAIDAAHAAFPAWKRKTAKERSEILYRW YELILENKRYLAELMTAEQGKPVQEAEGEVVYAANFIQWFAEQGKRVNGEIIPPAKPGSKIYATREPVGVVVAITPWNFP LAMLTRKLGPALAAGCTGVIKPANNTPLSAFALLALAQQAGVPDGVLNGVAGDTQAISDTVMASDKVRKISFTGSTAVGK TLVRNAADTMKKVSMELGGNAPYIVFDDADIQAAVKGAIANRFRNAGQVCVSANRFYIQDGVYDEFVSLLAEEVKKLKVG NGMDDGVVLGPLIDEAAVEKVEKHVNDAVEKGGKALVGGKRHKLGHSFFEPTVIVDANEAMLLAQEETFGPVAPCFRFKT EEEVIQRANNTPFGLAAYFYSQNLQRVFRVAEALESGMIGINECAVSTELAPFGGVKESGLGREGSVLGLDEFLEVKTWH VGGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-128 | 58 |
